Query= MSMg01no206_a16.b1 MSMg01no206_a16.b1 CHROMAT_FILE:
MSMg01no206_a16.b1 PHD_FILE: MSMg01no206_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:05 2005
(654 letters)
>mm_chr3_58197144_58198197
Length = 1054
Score = 1156 bits (598), Expect = 0.0
Identities = 637/658 (96%), Gaps = 15/658 (2%)
Strand = Plus / Plus
Query: 1 gctaaatagtgagatcctgcctcagaaacaaacagacagacagacagacagtcagaccag 60
|||||||||||||||||||||||||||||||||| ||||||||||| ||| ||
Sbjct: 208 gctaaatagtgagatcctgcctcagaaacaaacaaacagacagacaaaca--------ag 259
Query: 61 taccctaaacatgcattttaattccctacaagcttatgttcaaggtaaacagacatcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 taccctaaacatgcattttaattccctacaagcttatgttcaaggtaaacagacatcatc 319
Query: 121 atacaaataattcctgatctatacctgaggggggattgccacctcagagaggaaggaact 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 320 atacaaataattcctgatctatacctgaggggagattgccacctcagagaggaaggaact 379
Query: 181 gacatgctttgagcatacgtcaagtgttttataagcatagctttattaatcactcagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gacatgctttgagcatacgtcaagtgttttataagcatagctttattaatcactcagcac 439
Query: 241 tgctatggggtggatatcacgtaggcccatatttacagatgaggaaattaagattcaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgctatggggtggatatcacgtaggcccatatttacagatgaggaaattaagattcaggg 499
Query: 301 tgaggtaacttctctgaggtcacatacatagcatgcgattgagctgcaca----ccccct 356
||||||||||||||||||||||||| |||||||||||||||||||| | | || |
Sbjct: 500 tgaggtaacttctctgaggtcacatgcatagcatgcgattgagctggaaattaacc---t 556
Query: 357 taggttggctgtctgcaaatccagtgccctgtcttcccatctcaacttcgccagaggccc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 taggttggctgtctgcaaatccagtgccctgtcttcccatctcaacttcgccagaggccc 616
Query: 417 acggagtcataggaaacccagctgcgctaacacagtaatccatgccagcctgctgagtgt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 acggagtcataggaaacccagctgcgctaacacagtaatccatgccagcctgctgagtgt 676
Query: 477 atgtatggccagccccacaaagctccagaaaaggaaggataatctatgtttaggaactcc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 atgtatggccagccccacaaagctccagaaaaggaaggataatctatgtttaggaactcc 736
Query: 537 tgtagacttggactccacagaacacagcaatgaatcaaaagtattttatttaatatccac 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tgtagacttggactccacagaacacagcaatgaatcaaaagtattttatttaatatccac 796
Query: 597 gcatgtgtataatgtggttggataaattcaatcctccattccttcccctcttcccctt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gcatgtgtataatgtggttggataaattcaatcctccattccttcccctcttcccctt 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no206_a16.g1 MSMg01no206_a16.g1 CHROMAT_FILE:
MSMg01no206_a16.g1 PHD_FILE: MSMg01no206_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:05 2005
(652 letters)
>mm_chr3_58348110_58349161
Length = 1052
Score = 1170 bits (605), Expect = 0.0
Identities = 632/641 (98%)
Strand = Plus / Minus
Query: 1 cattcactcatttactagggatgcaaacttgaacaagtaataagatgatcctaattatta 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 641 cattcactcatttactagggatgcaaacttgaacaagtaataagatgatactaattatta 582
Query: 61 taccacctatttcctagggattgactttaagaacataatgccaaacacaaggtatatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 581 taccacctatttcctagggattgactttaagaacataatgccaaacacaaggtatatact 522
Query: 121 ccaatgaattatcaatctctatattaaagaagtcatagagcccattagatgggaaagatc 180
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 521 tcaatgaattatcaatctctatattaaagaagtcatagagctcattagatgggaaagatc 462
Query: 181 ggcctcagcctgctaatgtaaactgtgcttatcatatagaaattctgtatgaaaaataat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 agcctcagcctgctaatgtaaactgtgcttatcatatagaaattctgtatgaaaaataat 402
Query: 241 aataaagatagctgatcctgattaatctatcctaagcaacaagcatctatgttaacaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aataaagatagctgatcctgattaatctatcctaagcaacaagcatctatgttaacaaac 342
Query: 301 aacagtgttaccctagttaatgggatagagagctattctcttcacccagtttcagatgtc 360
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 341 aacagtgttaccctagttaatgggatagagagctattctctttattcagtttcagatgtc 282
Query: 361 aggaagtattcaaatgtagtagcacaagaaactatcaaacttgagatttccccctctgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aggaagtattcaaatgtagtagcacaagaaactatcaaacttgagatttccccctctgta 222
Query: 421 gcaaactaggaaagtggacattagtttttgtcaccttgatacaaactagagtcacctggg 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 221 gcaaactaggaaagtggacattagtttttgtcactttgatacaaactagagtcacctggg 162
Query: 481 aagacttcttgaggaattgcctccagcaaattagactgtaggcaaatccatggagccctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aagacttcttgaggaattgcctccagcaaattagactgtaggcaaatccatggagccctt 102
Query: 541 tcttgattactgcatgatgtgggaggacccaacccactgtgggttctaggttctataagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 tcttgattactgcatgatgtgggaggacccaacccactgtgggttctaggttctataagc 42
Query: 601 tgggccccggggagcaagactataagtagaattcttcagtc 641
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 tgggccccggggagcaagactataagtagaattcttcagtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
