Query= MSMg01no206_d04.b1 MSMg01no206_d04.b1 CHROMAT_FILE:
MSMg01no206_d04.b1 PHD_FILE: MSMg01no206_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:18 2005
(232 letters)
>mm_chr3_43375835_43376465
Length = 631
Score = 418 bits (216), Expect = e-121
Identities = 228/232 (98%), Gaps = 1/232 (0%)
Strand = Plus / Minus
Query: 1 gtttaagagctttcaacataactgaaataatatctgaataaggtgatataaattaagcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gtttaagagctttcaacataactgaaataatatctgaataaggtgatataaattaagcgc 372
Query: 61 tcaaataaggagaaaaatagatcaaatacaatagatgtactctcagaatataaagaatac 120
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 371 tcaaattaggagaaaaatagatcaaatactatagatgtactctcagaatataaagaatac 312
Query: 121 tgaaaaaaacaagtgagtatccaggaattatgttggatagtctactttatatgatccaca 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 311 tgaaaaaaacaagtgagtatccaggaattatgttggatagtctagtttatatgatccaca 252
Query: 181 gcatgtgaattattgtagtaaaatagatttctcactaagataatctgatgtc 232
|||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 251 gcatgtgaattattgtagtaaaatagattt-tcactaagataatctgatgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 631
Length adjustment: 9
Effective length of query: 223
Effective length of database: 622
Effective search space: 138706
Effective search space used: 138706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no206_d04.g1 MSMg01no206_d04.g1 CHROMAT_FILE:
MSMg01no206_d04.g1 PHD_FILE: MSMg01no206_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:18 2005
(291 letters)
>mm_chr3_43262062_43262754
Length = 693
Score = 518 bits (268), Expect = e-151
Identities = 287/294 (97%), Gaps = 4/294 (1%)
Strand = Plus / Plus
Query: 1 ttatccatataaagcttttattttttttt--atgtcaaacacatctatattaccccatta 58
||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||
Sbjct: 201 ttatccatataaagcttttatttttttttttatgtcaaacacatcta-attacaccatta 259
Query: 59 ttttttttt-cagagtttgtctctcagccttatacctgaatgtacacacatctaaatttt 117
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttttttttttcagagtttgtctctcagccttatacctgaatgtacacacatctaaatttt 319
Query: 118 tgtttctgtctgacctgtctcttgacttgaaggcttaccatgcttttcacgtggtttctg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgtttctgtctgacctgtctcttgacttgaaggcttaccatgcttttcacgtggtttctg 379
Query: 178 tttagtgaatacatgggaattattatttcttccacattcatggttgatgctgtgtccagc 237
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttagtgaatacgtggaaattattatttcttccacattcatggttgatgctgtgtccagc 439
Query: 238 ctggctcctaatcaatctaaagcttatctcttacattttgtttgccacagttat 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctggctcctaatcaatctaaagcttatctcttacattttgtttgccacagttat 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 693
Length adjustment: 9
Effective length of query: 282
Effective length of database: 684
Effective search space: 192888
Effective search space used: 192888
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
