Query= MSMg01no207_b04.b1 MSMg01no207_b04.b1 CHROMAT_FILE:
MSMg01no207_b04.b1 PHD_FILE: MSMg01no207_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:32 2005
(421 letters)
>mm_chr3_41835568_41836388
Length = 821
Score = 658 bits (340), Expect = 0.0
Identities = 391/408 (95%), Gaps = 4/408 (0%)
Strand = Plus / Plus
Query: 17 aattcc-taataga-cccccaattagatgtgtgaaaacccctttgcttgtttacttgcct 74
|||||| ||||||| |||||||| |||| |||||||||||| ||||||| |||||| |||
Sbjct: 215 aattccataatagaccccccaatcagatatgtgaaaacccccttgcttgcttactttcct 274
Query: 75 ctataaatgtttgcttgaaactgggctggggctacaccctcccgttctgcagtgtcaagc 134
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 275 ctataaatgtttgcttgaaactgggctggggctacaccctcctgttctgcagtgtcaagc 334
Query: 135 tccagcttgaataaagatcct-aaagtgattgcatcagaatcagctccttggtggtcttt 193
||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 335 tccagctcgaataaaga-ccttaaagtgattgcatcagaatcagctccttggtggtcgtt 393
Query: 194 tggggttctcaaatgcttcctgaataggcatagtgctctcaagtcaggaaactgaaggaa 253
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 394 tggggttctcaaatgcttcctgaataggcatagtgctttcaggtcaggaaactgaaggaa 453
Query: 254 cattgctgctgagtacaaactctggaatttgttccagccctgtttagtgttaggtgctgt 313
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 454 cattgctgctgagtacaaactctggaattttttccagccctgtttagtgttaggtgctgt 513
Query: 314 ccctttatttggaactttagatgctttccctatctttggacttcttggctttctagttct 373
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 514 ccctctatttggaactttagatgctctccctatctttggacttcttggctttctagttct 573
Query: 374 caattatcccacacgcacagttcttgcttttgttttgaggcagggcct 421
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 caattatcccacacgcacagttcttgcttttgttttgaggcagggcct 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no207_b04.g1 MSMg01no207_b04.g1 CHROMAT_FILE:
MSMg01no207_b04.g1 PHD_FILE: MSMg01no207_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:32 2005
(385 letters)
>mm_chr3_41868702_41869483
Length = 782
Score = 721 bits (373), Expect = 0.0
Identities = 381/385 (98%), Gaps = 3/385 (0%)
Strand = Plus / Minus
Query: 1 aatttaccaaagtgatattgaaatatgggggagaagtcacggcatgctgattaagtttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aatttaccaaagtgatattgaaatatgggggagaagtcacggcatgctgattaagtttca 523
Query: 61 agctgccatcttactaataccatctcacaaatctgtaggctccatcatcaccatagcaac 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 522 agctgccatcttactaataccatctcacaaacctgtaggctccatcatcaccatagcaac 463
Query: 121 atgatcattatatcaaccctaaaaacaggctacaccacagactgttcatttacatttatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 atgatcattatatcaaccctaaaaacaggctacaccacagactgttcatttacatttatg 403
Query: 181 ataaatgctggaaaagccaggtacattattacaccgggactctgatagaacctgacatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ataaatgctggaaaagccaggtacattattacaccgggactctgatagaacctgacatcc 343
Query: 241 tagaaaaattgtaaagagcagaaaatattatctttcaataatgttagctatttgacacac 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 342 tagaaaaattgtaaagagcagaaaa---tatctttcaataatgttagctatttgacacac 286
Query: 301 acaaacaaacatataggaaagattaatgaatgggaaagtcaaatattcatctaataagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 acaaacaaacatataggaaagattaatgaatgggaaagtcaaatattcatctaataagaa 226
Query: 361 ataaacatggaaaatatgctttact 385
|||||||||||||||||||||||||
Sbjct: 225 ataaacatggaaaatatgctttact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 782
Length adjustment: 9
Effective length of query: 376
Effective length of database: 773
Effective search space: 290648
Effective search space used: 290648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
