Query= MSMg01no207_j11.b1 MSMg01no207_j11.b1 CHROMAT_FILE:
MSMg01no207_j11.b1 PHD_FILE: MSMg01no207_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:43 2005
(271 letters)
>mm_chr3_140490071_140490741
Length = 671
Score = 495 bits (256), Expect = e-144
Identities = 268/272 (98%), Gaps = 2/272 (0%)
Strand = Plus / Plus
Query: 1 attgcatctgagttaactggaacacacttcatggctggaaatggttcatactgtacagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgcatctgagttaactggaacacacttcatggctggaaatggttcatactgtacagtg 260
Query: 61 ctctccatgtagtagtagtgaacaagtattccatgccaaggaccctgttttcttagatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctccatgtagtagtagtgaacaagtattccatgccaaggaccctgttttcttagatag 320
Query: 121 ttgaatgcttcccctatggacttcttattctttatctgtatttatcccagaactctactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaatgcttcccctatggacttcttattctttatctgtatttatcccagaactctactg 380
Query: 181 aagccaaatacttgcactgtcttgtcttctatgcagcatccttacctattttaacttaaa 240
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 aagccaaatacttgcactgtcttgtcttctatgcagtgtccttacctattttaacttaaa 440
Query: 241 gggca-tcggataattctcaccactgtgacaa 271
||||| | ||||||||||||||||||||||||
Sbjct: 441 gggcaat-ggataattctcaccactgtgacaa 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 671
Length adjustment: 9
Effective length of query: 262
Effective length of database: 662
Effective search space: 173444
Effective search space used: 173444
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no207_j11.g1 MSMg01no207_j11.g1 CHROMAT_FILE:
MSMg01no207_j11.g1 PHD_FILE: MSMg01no207_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:43 2005
(383 letters)
>mm_chr3_140562290_140563072
Length = 783
Score = 387 bits (200), Expect = e-112
Identities = 209/212 (98%)
Strand = Plus / Minus
Query: 1 catcactagttgggcatgtagaacacaacttattaggaatgcctgcctttcccttgccct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 412 catcactagttgggcatgtagaacacaacttattaggaatgcctgcctttcccttgttct 353
Query: 61 aaaaactatgaaagtctgtttctgattcctctttttttttctatttactacatttaatga 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 352 aaaaactatgaaagtctgtttctgatccctctttttttttctatttactacatttaatga 293
Query: 121 aatatgagtggcaacagatgtctcttgtcaactttctatcatatccttttttattccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 aatatgagtggcaacagatgtctcttgtcaactttctatcatatccttttttattccttc 233
Query: 181 ttttctgctgtacattttaggtatgcgataaa 212
||||||||||||||||||||||||||||||||
Sbjct: 232 ttttctgctgtacattttaggtatgcgataaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
