Query= MSMg01no207_n21.b1 MSMg01no207_n21.b1 CHROMAT_FILE:
MSMg01no207_n21.b1 PHD_FILE: MSMg01no207_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:31:21 2005
(447 letters)
>mm_chr3_129013520_129014366
Length = 847
Score = 667 bits (345), Expect = 0.0
Identities = 372/383 (97%), Gaps = 4/383 (1%)
Strand = Plus / Minus
Query: 24 tctctctctctctctccctccccctcttctcttccctcccatgtgcttgcttccctgggc 83
|||||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||
Sbjct: 624 tctctctctctctctctctctccctcttctcttctctcccatg----tgcttccctgggt 569
Query: 84 gtctttaacactttcagatttatctgtatactagagcctttggaagtgatgtcctctctc 143
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 568 gtctttaacactttcagatttatctgtatactagagcctttggaagtgatgtcctcactc 509
Query: 144 atatcaaaaggtaattgaattgacattaattaattataatgtccgtgttcactagagaag 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 atatcaaaaggtaattgaattgacattaattaattataatgtccgtgttcactagagaag 449
Query: 204 agattgcatgcatttgctcaaggatttgtgcaaattgtactttccaacattgtaaaaact 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agattgcatgcatttgctcaaggatttgtgcaaattgtactttccaacattgtaaaaact 389
Query: 264 gttggctatagggtcatactttcccaagcttgagggctattcttatgccacagtaagagc 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gttggctatagggtcatactttcccaagcttgagggctattcttatgccacagtaagagc 329
Query: 324 gacccctacaatgagaacatgacaagaaaatcatgactctttccttgattttcaatgaat 383
||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 328 gacccctacaatgagaacatgacaagaaaatcacgactcttaccttgattttcaatgaat 269
Query: 384 atatatatatatatatatatata 406
|||||||||||||||||||||||
Sbjct: 268 atatatatatatatatatatata 246
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no207_n21.g1 MSMg01no207_n21.g1 CHROMAT_FILE:
MSMg01no207_n21.g1 PHD_FILE: MSMg01no207_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:31:21 2005
(383 letters)
>mm_chr3_128924893_128925675
Length = 783
Score = 675 bits (349), Expect = 0.0
Identities = 377/391 (96%), Gaps = 8/391 (2%)
Strand = Plus / Plus
Query: 1 aggttggtggaggctgggagaatggtgtataaaacctctatgtacgttctcaccaccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aggttggtggaggctgggagaatggtgtataaaacctctatgtacgttctcaccaccttc 252
Query: 61 tgtccctaaatctcagattggatgcccacaacttgcttacaaaggtaattatccgggaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 253 tgtccctaaatctcagattggatgcccacaacttgcttacaaaggtaattataagggaaa 312
Query: 121 gatagtggcaagccccagccctataagcagcctgattaaaagaggaatctgtttctccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 313 gatagtggcaagccccagccctataagcagcctgattaaaagaggaatctgcttctccct 372
Query: 181 gacctggcttccctccccccttaccccctgccaccccccc--------ccatctctcagg 232
||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 373 gacctggcttccctccccccttaccccctcccacccccccacccccccccatctctcagg 432
Query: 233 gtactgaaaccagaagtcctttttagagcataacgacaccgccaacaaattaatgggaga 292
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 433 gtactgaaaccagaagtcctttttagagcataacaacaccgccaacaaattaatgggaga 492
Query: 293 aaaagaaataccatctttaaagtcccaatattcctcaaagttctataaattaacccgtgg 352
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 493 aaaagaaataccatctttaaagtcccaatattcctcaaagtcctataaattaacccgtgg 552
Query: 353 agagcatcgaacccttttaaggagcgtctat 383
|||||||||||||||||||||||||||||||
Sbjct: 553 agagcatcgaacccttttaaggagcgtctat 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
