TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCCTTAAAGAATAGCCCCTCTGGCTATCTATCCCTTGCTTCAGGG
CAGATGAGCAGGGATTGGAGCCCTGGGATGTATGCTTGTTATAGTGTGTG
TGTGTTGTGTGTTTGACACATGTGTTAGGTGCAGAGTGTGCGGGCCTGCA
TTTTCACCATGGTAGCATAGGCTTTTGCTGCAGTGGAGGCGGGACAATCT
CCTCAGAATCGGTTTGCCGCTCTAAAAGAAATTATGCTGTGTTATGCCGT
GGGGTGCGAGGCTAAGCACTGCACATATTATATCTTGCTGTTGGCATCCT
GTGGAAGGCATGTTTTTTTTTTTTCCCCCCCCCCCCCCCCGTTGTTTTTT
TTATAGAAAATGATATGTCCCCCCCCCAAAAAAAAAAAAAAAAATGTTCC
CCGGGCGATGCCCCCTTCCTACCCCCTCCCCCATCCCCCCCCCCCCACCT
CCTCTCTCCCTCTCCTCTCCCTTCTCCTCTCACTCCTCCTCCCGCCTCTC
CTACTATTCCCCCTCCCTCCCCTCTTTTCTTCTCCATCACCCCACAACCC
TCCAACACCCCCTCTCGCCCTCCCCCTCTCCCTCTCATAACCCCCCTCCC
TCTCATTTCATCTTCTCCATCCCCTCTTCTCTACTTAACTTTTCTCACAC
TAATACTTCTTACTATTATCAACTCTTTCACCCTCTCCTACTCCCTCCTC
ATCCTTCATCCTCTTTTTCCCCTTCCTT

GGGACACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAATTTTCTTACCTTAAAT
TTGTGCATGTACCCATCAAAATGAATTGTCTGTTGCTAGCTTTGTTTATA
GCCATGTGTACCTGACATCTTATTTATTACCAAAAGCAGAGAAAAATTGT
GATAATAGACTACAGCACAGTCTGAAAAGAGGACTTTTGAATTATCATTT
TGACCAGTGTTTCTAATGATAATGTTATGACTGTAAACCTTCTGCAACTA
TGTGAATATTTGCTTTGTATTTATTCAGAAAATGTTATATTTTTCACAGA
TGAGCTTATTACAAATGTTTGGAATTTAGTTATTTTTTTATGCCAGTTCT
TGTTATTTGCATGTCTTGAACATGGAGAAAATTAATGAGAAAAAGTTTGT
ATCAAATTCTCATATTTGGAAAATATTTCACAGGATTTTTTTTTTTAAGA
TTGTGGATAAATATTTGAAAGCTGAATTGTTTGGGGTAAATATCTTTTTA
ATTACTATTCAGTATTCTTTTTACTCATCTGCATTTTTTAAAAAATCTTT
TTGTGAAAATCTTAACATTATATGANATAATACAAAGGCAAATTTTAAAT
ACTTTATGTTAATAGATGAACAAATGGAATTCCNACATGATGAAATAGTA
AGAGGCATTATGTTGAAAAACCAGGCCAATATATATCCTCCTAATTTCGG
CTTGTTTCACTAAT

Query= MSMg01no210_i05.g1 MSMg01no210_i05.g1 CHROMAT_FILE:
MSMg01no210_i05.g1 PHD_FILE: MSMg01no210_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:05 2005
         (522 letters)



>mm_chr3_6110908_6111827
          Length = 920

 Score =  936 bits (484), Expect = 0.0
 Identities = 512/522 (98%), Gaps = 2/522 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taattttcttaccttaaatttgtgcatgtacccatcaaaatgaattgtctgttgctagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taattttcttaccttaaatttgtgcatgtacccatcaaaatgaattgtctgttgctagct 260

                                                                       
Query: 61  ttgtttatagccatgtgtacctgacatcttatttattaccaaaagcagagaaaaattgtg 120
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 ttgtttatagccatgtgtacctgacatcttatttattacaaaaagcagagaaaaattgtg 320

                                                                       
Query: 121 ataatagactacagcacagtctgaaaagaggacttttgaattatcattttgaccagtgtt 180
           ||||||| ||| |||||||||||||||||| |||||||||| |||| |||||||||||||
Sbjct: 321 ataatagtctatagcacagtctgaaaagagtacttttgaatcatcactttgaccagtgtt 380

                                                                       
Query: 181 tctaatgataatgttatgactgtaaaccttctgcaactatgtgaatatttgctttgtatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaatgataatgttatgactgtaaaccttctgcaactatgtgaatatttgctttgtatt 440

                                                                       
Query: 241 tattcagaaaatgttatatttttcacagatgagcttattacaaatgtttggaatttagtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattcagaaaatgttatatttttcacagatgagcttattacaaatgtttggaatttagtt 500

                                                                       
Query: 301 atttttttatgccagttcttgttatttgcatgtcttgaacatggagaaaattaatgagaa 360
           |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttgtttatgtcagttcttgttatttgcatgtcttgaacatggagaaaattaatgagaa 560

                                                                       
Query: 361 aaagtttgtatcaaattctcatatttggaaaatatttcacaggatttttttttttaagat 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 561 aaagtttgtatcaaattctcatatttggaaaatatttcacaggattttttttt--aagat 618

                                                                       
Query: 421 tgtggataaatatttgaaagctgaattgtttggggtaaatatctttttaattactattca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tgtggataaatatttgaaagctgaattgtttggggtaaatatctttttaattactattca 678

                                                     
Query: 481 gtattctttttactcatctgcattttttaaaaaatctttttg 522
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gtattctttttactcatctgcattttttaaaaaatctttttg 720


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 920
Length adjustment: 10
Effective length of query: 512
Effective length of database: 910
Effective search space:   465920
Effective search space used:   465920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)