Query= MSMg01no231_b20.b1 MSMg01no231_b20.b1 CHROMAT_FILE:
MSMg01no231_b20.b1 PHD_FILE: MSMg01no231_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:19 2005
(379 letters)
>mm_chr3_104992744_104993523
Length = 780
Score = 611 bits (316), Expect = e-179
Identities = 328/332 (98%), Gaps = 1/332 (0%)
Strand = Plus / Minus
Query: 12 caggcacatttttaaaaaaga-aaccaggagaggaatttgttgtgaaaaatacatgaagt 70
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 504 caggcacattttttaaaaagataaccaggagaggaatttgttgtgaaaaatacatgaagt 445
Query: 71 ttttcacgccaaactaagcttctgctttctattgcagacccatggaccagaagagaagct 130
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttttcacggtaaactaagcttctgctttctattgcagacccatggaccagaagagaagct 385
Query: 131 tggccacagccaggccttgcttgcttgacagaatgaagatctagttacttttatttttct 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tggccacagccaggccttgcttgcttgacagaatgaagatctagttacttttatttttct 325
Query: 191 gttcctctcctaaaccagccttctcaccttccagggaagcaattctccacagccagttca 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gttcctctcctaaaccagccttctcaccttccagggaagcaattctccacagccagttca 265
Query: 251 ccaacctctctatccaaaccagatccctgagcaaagccccaagcttcagtcagctctctc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccaacctctctatccaaaccagatccctgagcaaagccccaagcttcagtcagctctctc 205
Query: 311 tctctctctctctctctctctctctctctctc 342
||||||||||||||||||||||||||||||||
Sbjct: 204 tctctctctctctctctctctctctctctctc 173
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 780
Length adjustment: 9
Effective length of query: 370
Effective length of database: 771
Effective search space: 285270
Effective search space used: 285270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_b20.g1 MSMg01no231_b20.g1 CHROMAT_FILE:
MSMg01no231_b20.g1 PHD_FILE: MSMg01no231_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:19 2005
(286 letters)
>mm_chr3_104855266_104855950
Length = 685
Score = 507 bits (262), Expect = e-148
Identities = 280/286 (97%), Gaps = 1/286 (0%)
Strand = Plus / Plus
Query: 1 cagggatccaatataggggtgggggctgcagcctagaaaacggtacccaccagtaccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagggatccaatataggggtgggggctgcagcctagaaaacggtacccaccagtaccact 260
Query: 61 ctgaggctagggctgggcaaaaggcgacctagagtgaggcaggtcaggaggagacccctg 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 ctgaggctagggctgggcaaaaggcgacctagagtgagacaggtcaggaggagacccctg 320
Query: 121 ctgaggggcggaggctagcgagagacaatgaacaatcgtaaagaccccggaggatgccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaggggcggaggctagcgagagacaatgaacaatcgtaaagaccccggaggatgccgc 380
Query: 181 gacgcctcctcggggaatcccgggatctggaggcggcggccccgccccctagggggacca 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacgcctccttggggaatcccgggatctggaggcggcggccccgccccctagggggacca 440
Query: 241 tccctattctcgacagggacttctgctgaaagtcactcacgctccg 286
|||||| | |||||||||||||||||||||| |||||||||||||
Sbjct: 441 tccctaccc-cgacagggacttctgctgaaagccactcacgctccg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
