CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTGTTAACAACTGGGATCAACAAGAGCTCCACCTAAGATTCACT
TAATCTTAGAAGCCAGGGTCAAGGGATTCATTCCCTTGCCATAGTTCCTA
TTTTAGTCTATTGTATAGTCCACCTTTCCCTTAGGCCATTGTAAATACGT
GTGTATGGGTGTAACTCAGCTATCTATAGTTCTAAGTATCTATTCTGGTT
CCCCTTTAGGTCTCAAACTTCCTTCTTCCTAGAAGATGGTAAATGCCCGT
GTAGGGCAGTGACTTAGCTTTTATTCAAAGTGATAGTGTAATACCAGAGG
CAATTCTGAATGTCACTGAATAGCAACTTTCTTACTGAATTCCAAGCCCA
TGGTCTGCTCAAGGACTTTCTAGGACGTTGGAACCCTGCTGAAGGCTTAG
CTATGTCATAATTCAATCTTAAAAGGCACTTATAATAGGATAATACTAAA
AGAGAGCACGTGGTTCCATACACAAGACTAATGTGGGAATGGAATATTAA
TGTATGGGTTAGAGAGGATGCCAGACTCCAGGAGGTGAGTTTCCGTGAAA
CTCTGCCTCGTGAGTAGCTTCTAAGCCTCTCGGCCTGTCAAGCTGACTCG
ACCAGAGTGCGTGGCAGTTTATAGAGTATTAACATACATTATAATTATAC
CTGATGTATGTATGCTTGTATTAN

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCTGGGTTGTATTACTTCTTCATTTGC
TATATCAGATACAAACTTAGTATACAAATTTAGTGTTAACATTTATGTAA
TTTTGGGTCATATATGGTATTGAAAAGTCAGGTTGGTTTTTTTTACAAGT
TTTATTTATTAAGATTTAATATTTATGCCATATTTATAAATTCTCTCCTA
GAGAATGATACTATTCAGTACATCAGGAATATTCTTTGGAATGAATTTTT
ACTATTAGAATTTAGGTTATAAAGCCTCACAATTAAAAAAAGAACTAGCT
TAGCTTATCCTCTTTTACACTTCCATATTTTCACTGTTTATCTAGTTAAA
AACATTCCTTAGTGTTACCATAAAGCTGCAAAAGTGGGTTGGCGACAAGG
GTGTGCCACTAAGAGGTCACACCACACAACAGATTAGTCCAAGAGATTTA
TTAGGGTAGGGGTGAGTGGGAAAGNNCTNNTNNNNTNNNNTTTNNNNTTT
TNTTTTTTTTNTTTTNNTTTTTTTTTTTNNTTTTTTTTTTNNTNTTTTTT
TTTTTNNTTTTTTTTTTTTTTNNTTTTTTTNNNNTTTTTTTTTTNNTTTT
TTTCTTNTTTTTTTTNTTTTTCTTNNTTTTTTTNTNTTTNTTTNTTCCTT
TTNTTNTTTTTTCTTTTCCTTTTTTCCTCCTT

Query= MSMg01no231_i15.g1 MSMg01no231_i15.g1 CHROMAT_FILE:
MSMg01no231_i15.g1 PHD_FILE: MSMg01no231_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:51 2005
         (450 letters)



>mm_chr3_6802551_6803401
          Length = 851

 Score =  818 bits (423), Expect = 0.0
 Identities = 444/451 (98%), Gaps = 1/451 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgggttgtattacttcttcatttgctatatcagatacaaacttagtatacaaatttag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgggttgtattacttcttcatttgctatatcagatacaaacttagtatacaaatttag 260

                                                                       
Query: 61  tgttaacatttatgtaattttgggtcatatatggtattgaaaagtcaggttggttttttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttaacatttatgtaattttgggtcatatatggtattgaaaagtcaggttggttttttt 320

                                                                       
Query: 121 t-acaagttttatttattaagatttaatatttatgccatatttataaattctctcctaga 179
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacaagttttatttattaagatttaatatttatgccatatttataaattctctcctaga 380

                                                                       
Query: 180 gaatgatactattcagtacatcaggaatattctttggaatgaatttttactattagaatt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatgatactattcagtacatcaggaatattctttggaatgaatttttactattagaatt 440

                                                                       
Query: 240 taggttataaagcctcacaattaaaaaaagaactagcttagcttatcctcttttacactt 299
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 taggttataaagcctcacaattaaaaaaataactagcttagcttatcctcttttacactt 500

                                                                       
Query: 300 ccatattttcactgtttatctagttaaaaacattccttagtgttaccataaagctgcaaa 359
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 501 ccatattttcactgtttatctagttaaaaacattccttagtgttaggataaagctgcaaa 560

                                                                       
Query: 360 agtgggttggcgacaagggtgtgccactaagaggtcacaccacacaacagattagtccaa 419
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtgggttggcgacaagggtgttccactaagaggtcacaccacacaacagattagtccaa 620

                                          
Query: 420 gagatttattagggtaggggtgagtgggaaa 450
           |||||||||||||||| ||||| ||||||||
Sbjct: 621 gagatttattagggtacgggtgggtgggaaa 651


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 851
Length adjustment: 10
Effective length of query: 440
Effective length of database: 841
Effective search space:   370040
Effective search space used:   370040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)