CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGCCAATGGAATAGGAAGGAAAAAGAAGATGACCACTTCCAAACC
TGGCAACAAAGCCTCTTCCCCACAACTCTCTAACTTCTTAGTCTCTATAA
GACTAAAGGACAAATGACAGACCTAGGATTCATTGGTGGAACATAGATCA
TGACTTATTTTGTGGTTTGAATATCATGACAATAGCCTACAGAACTTTTG
GAAACAGTGCTCCTGTACTGCTCTCCCTCCTTCATCACAACACACCTTCA
TTGCTACATCCACTCCAGTAGTGACAAGCGCGACAGGTCCCAAAAACCTG
GGCACTGTCCCGAGGCAAAAAGTTCATGGAAACTTAGTCTCCTGGAACCG
TGGCATCCTGTATAAAGAATGCTCCAATGACCTTGCTTTAGTTGGTAAAT
GGATCTGTGTGCTTTCCCTTGATATTGCTTAATTACAAGTGCTCCTAAGG
ATTGATATTTTGACATATAGCTAAGTTAGATTCTAGGCAGCCCTTGATCC
AACCTTGGGCATGGATAGCTAAGTCACTGCCCTACACTGAAATTTACCAT
TATCTAGGAAGAAGGAAGTTTGTGACCTAAAGAGGAACCAGAGTAGATAC
TTAGAACTATAGATAGCTGAGTTATACCCATACACATGTATTTACTATGG
CCTAGGGGAAAGGTGGACTATACAATAGACTAGAG

GCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTAGGAGCCTGGTTCATTTGATTTGGA
AGGCTTTAGTCTCCTGCTGTGTTTCATCTCTCCCCCGCCCCCTCTGGCTC
TCACACTCCTGCCTCCTTTCATACAGTTCCTTGCCTGAGGTCTGTGGGCA
GAGAGTTGATTGAGACAGTCAAGAGCTATATTTTCCAAGGCCTCTGCTCC
TCCCTCTCTCCCTCCCTCCCTTTTTCCCTCCCTCCCTCCCCTCCTCCCTC
CCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCCCCCCCCCCCCCCCCC
CAGTGTCTGGCTGTGGGTCCCTGTATTTGTTCCCATCTGCTTCAGGAGGA
AGCTTCCTTGATGACGACGGTTGAGTAAGGCACTGATCTATGAGTTTAGT
AGACTATTAATAGTTATTTTCTTGTTACTTTATTGTTGTTTAGACCAGAA
GGACTTGGTTTTATCCTAGGTCTCTAAGCTATCTAGTTTATGGTTCGTGG
TCACACAAGCAGTGCTGGATATAGGTTCCATCTTAGGGAGTAATCAGATA
CTGGTTGGTTACTCCTATAAGCTTTGTGTCATTATTGCCCTAGCATGTTT
TTCAGGCAGGATCGAGTGTAAATTAAAAGTTTTGTGGCTGAGTTGGCGTT
TGTGGGTTTTTGTTTGTTCCCA

Query= MSMg01no233_a07.b1 MSMg01no233_a07.b1 CHROMAT_FILE:
MSMg01no233_a07.b1 PHD_FILE: MSMg01no233_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:39 2005
         (690 letters)



>mm_chr3_16192793_16193882
          Length = 1090

 Score =  866 bits (448), Expect = 0.0
 Identities = 454/456 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   aattcagccaatggaataggaaggaaaaagaagatgaccacttccaaacctggcaacaaa 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aattcagccaatggaataggaaggaaaaagaagatgaccacttccaaacctggcaacaaa 397

                                                                       
Query: 66  gcctcttccccacaactctctaacttcttagtctctataagactaaaggacaaatgacag 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gcctcttccccacaactctctaacttcttagtctctataagactaaaggacaaatgacag 337

                                                                       
Query: 126 acctaggattcattggtggaacatagatcatgacttattttgtggtttgaatatcatgac 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 acctaggattcattggtggaacatagatcatgacttattttgtggtttgaatatcatgac 277

                                                                       
Query: 186 aatagcctacagaacttttggaaacagtgctcctgtactgctctccctccttcatcacaa 245
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 276 aatagcctacagaacttttggaaacagtgctcctgtactgctccccctccttcatcacaa 217

                                                                       
Query: 246 cacaccttcattgctacatccactccagtagtgacaagcgcgacaggtcccaaaaacctg 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 cacaccttcattgctacatccactccagtagtgacaagcgcgacaggtcccaaaaacctg 157

                                                                       
Query: 306 ggcactgtcccgaggcaaaaagttcatggaaacttagtctcctggaaccgtggcatcctg 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ggcactgtcccgaggcaaaaagttcatggaaacttagtctcctggaaccgtggcatcctg 97

                                                                       
Query: 366 tataaagaatgctccaatgaccttgctttagttggtaaatggatctgtgtgctttccctt 425
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  tataaagaatgctccagtgaccttgctttagttggtaaatggatctgtgtgctttccctt 37

                                               
Query: 426 gatattgcttaattacaagtgctcctaaggattgat 461
           ||||||||||||||||||||||||||||||||||||
Sbjct: 36  gatattgcttaattacaagtgctcctaaggattgat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space:   734400
Effective search space used:   734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)