TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTACTGAATTCCAAGCTCCTCATCTTCAAGGATTTTCTAGGACAT
TGGAACACTGACATAGGCTTACCTATGTCAGAATTCAATCTTTAAAGGCA
CTTATAATAAAACAATACTGAAAGAGAGCATGTGGATCCATACACCAGAC
TAATGAGGAGACAGGGTATGAGTATATGGGTTATGAGAATGCCAAGGTTC
CAGGAGGTTGAGTTTCCTTGAAACTCTTTGCCTCGTGAGTGCTTCCAGGC
CTCTCGGCCTGTCAAGCAGACTTCACTGGAGTGGACATAGCAACCAAACA
TTATTCTAGATAGAGAAAGGCTGAAAATATTTCCTTAAAAACAAGAACAG
ATACAGGAGTAAATGTGACAAAGGTGTCTACTTTCTCAAGTTTACTTCAA
TATAACACTCAAAGCCTTAGGAGATAAATAAGGCAAGAGAAAGTAATAAA
ATTGGTAGAAATATGAAAAAACTCACTGTCACTATTTGAAAATTATATAG
ACATATCTGTAAAAGATCACTTAAGATTCCTCANAAAAAAATCTCTGAAA
AAAGAAGAATCAGGAGAGAGTCTTCTGTCTTCCAATGTCCTTATGTAGGT
CTCCAGCAGGAGGTGTGGCCCANATTAACGATGTATACCACCATACCTGG
ATCTGGGACTTGTTTTGTCCCAGATGACCTTGAACTCA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCATTCTTTTTATTAGAAGCATTGG
GTGTTAGAGAGAAATTTTTAATTTAATTTTTATTTATTATCTTATGTGCA
CGGGTATTTTGGCTTCTTATATGTCTGTATACCATGTACGAGAATAGAGC
ATGTGATCTCCTGGAACTGGAGTTAGATGGTTATTAGTCACTATGTGGGT
GCTGGAAGTTGAACTCAAGACCTTTGGAAGAACAGCCAGTGTTTTAACCA
CTGAGATATCTCTCCAGTCCCTGGGAAAATTTTTAATGTGGTCTAGTACA
TATAAAGTATATAAAAGTAAAAGAACATACTATTTATAGAATTTTGCAAT
TGAAATATATTGAATATATTCTTTCATTTTGAAAGGCAAAGCGTATAGCT
ACTGAGGAAAACAATCAAAATTATAATGTATATTATGGATAGGATTAGAA
CCCGCGACTCATTTGTTATGTCCCATCATCTTTCATTGTTATTTGGAAAC
TTTAGGTTGCATGCCAGAAGAAAAGTATGGTGCATTTCCATGAAACCTAA
TGCAAGAGTCAGCAATTTGATTGTTTGGAATAAATAAATACTAGATAGAT
AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG
ATGATCGAAAGCCTCCTTCCCCCCCCCCCCTTCTCTCCCTCTA

Query= MSMg01no235_a03.g1 MSMg01no235_a03.g1 CHROMAT_FILE:
MSMg01no235_a03.g1 PHD_FILE: MSMg01no235_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:12 2005
         (626 letters)



>mm_chr3_136627139_136628166
          Length = 1028

 Score = 1073 bits (555), Expect = 0.0
 Identities = 607/627 (96%), Gaps = 8/627 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cattctttttattagaagcattgggtgttagagagaaatttttaatttaatttttattta 60
           |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 201 cattctttttattagaagcattggatgttagagataaatttttaatttaatttttattta 260

                                                                       
Query: 61  ttatcttatgtgcacgggtattttggcttcttatatgtctgtataccatgtacgagaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ttatcttatgtgcacgggtattttggcttcttatatgtctgtataccatgtacaagaata 320

                                                                       
Query: 121 gagcatgtgatctcctggaactggagttagatggttattagtcactatgtgggtgctgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagcatgtgatctcctggaactggagttagatggttattagtcactatgtgggtgctgga 380

                                                                       
Query: 181 agttgaactcaagacctttggaagaacagccagtgttttaaccactgagatatctctcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttgaactcaagacctttggaagaacagccagtgttttaaccactgagatatctctcca 440

                                                                       
Query: 241 gtccctggg--aaaat-ttttaatgtggtctagtaca--tataaagtatataaaagtaaa 295
           |||||||||  |   | ||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 441 gtccctggggga---tcttttaatgtggtctagtacaaatataaagtatataaaagtaaa 497

                                                                       
Query: 296 agaacatactatttatagaattttgcaattgaaatatattgaatatattctttcattttg 355
           |||||||| | ||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 498 agaacataatttttatagaattttacaattgaaatgtattgaatatattctttcattttg 557

                                                                       
Query: 356 aaaggcaaagcgtatagctactgaggaaaacaatcaaaattataatgtatattatggata 415
           ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aaaagcaaagcgcatagctactgaggaaaacaatcaaaattataatgtatattatggata 617

                                                                       
Query: 416 ggattagaacccgcgactcatttgttatgtcccatcatctttcattgttatttggaaact 475
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ggattagaacccgggactcatttgttatgtcccatcatctttcattgttatttggaaact 677

                                                                       
Query: 476 ttaggttgcatgccagaagaaaagtatggtgcatttccatgaaacctaatgcaagagtca 535
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 678 ttaggttgcatgccagaagaaaagtatggtgcatttccgtgaaacctaatgcaagagtca 737

                                                                       
Query: 536 gcaatttgattgtttggaataaataaatactagatagatagatagatagatagatagata 595
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 738 gcaatttgattgtttggaataaataaatactacatagatagatagatagatagatagata 797

                                      
Query: 596 gatagatagatagatagatagatagat 622
           |||||||||||||||||||||||||||
Sbjct: 798 gatagatagatagatagatagatagat 824


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1028
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1018
Effective search space:   627088
Effective search space used:   627088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)