Query= MSMg01no235_f02.b1 MSMg01no235_f02.b1 CHROMAT_FILE:
MSMg01no235_f02.b1 PHD_FILE: MSMg01no235_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:37 2005
(662 letters)
>mm_chr3_76318778_76319839
Length = 1062
Score = 1249 bits (646), Expect = 0.0
Identities = 655/658 (99%)
Strand = Plus / Plus
Query: 5 gaattccagcaatctcaccatttataccactgaggcagagaaaaatacaaatataagcca 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagcaatctcagcatttataccactgaggcagagaaaaatacaaatataagcca 264
Query: 65 tgggaattatgtagagagaaacaaatcagaaagaagcaatcacttagtccttcacccatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgggaattatgtagagagaaacaaatcagaaagaagcaatcacttagtccttcacccatt 324
Query: 125 tttaaggtcttcgaatgcccttacttatccattttaaagtataatatcaaaataatttgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttaaggtcttcgaatgcccttacttatccattttaaagtataatatcaaaataatttgt 384
Query: 185 aacaacagtaatgcacttatactacactgatggtgatagagacacatttgtaggaatttc 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cacaacagtaatgcacttatactacactgatggtgatagagacacatttgtaggaatttc 444
Query: 245 atatctttaaatcatttggtattatgaaatattacacttatacccctgttttgaagatga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atatctttaaatcatttggtattatgaaatattacacttatacccctgttttgaagatga 504
Query: 305 tagttcagataaaattagtgatatcacttgcatatatccatattccttgtttttatttca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagttcagataaaattagtgatatcacttgcatatatccatattccttgtttttatttca 564
Query: 365 ttcttttatacagtatcatttttctacaacttaatcattttttagctgccaagactgaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcttttatacagtatcatttttctacaacttaatcattttttagctgccaagactgaaa 624
Query: 425 ttcataattttatatgtgtcctttgaattagtgttttatacaatttttatggtcttacta 484
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 625 ttcataattttatatgtgtcctttgaattagtgttttctacaatttttatggtcttacta 684
Query: 485 atttacatgcaagtgaactactcaagtttaccactgataaatcatgatacagaaatagtc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atttacatgcaagtgaactactcaagtttaccactgataaatcatgatacagaaatagtc 744
Query: 545 cctgcactactagagtataaaagaaacacattttagaggaagtggatatacatgtgtaaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cctgcactactagagtataaaagaaacacattttagaggaagtggatatacatgtgtaaa 804
Query: 605 actatcttgtcagtgcgccagcagtctgccttattactactgaaagaaattcccagca 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 actatcttgtcagtgcgccagcagtctgccttattactactgaaagaaattcccagca 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no235_f02.g1 MSMg01no235_f02.g1 CHROMAT_FILE:
MSMg01no235_f02.g1 PHD_FILE: MSMg01no235_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:37 2005
(489 letters)
>mm_chr3_76436373_76437262
Length = 890
Score = 594 bits (307), Expect = e-174
Identities = 313/315 (99%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 176 atttgtaccaaatgtgcagcttggtcttcatgcaggtcccctaataagttttgccattgg 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 atttgtaccaaatgtgcagcttggtcttcatgcaggtcccctaataagttttgccattgg 831
Query: 236 atcccctttcccaacctgaactgcctggttggactcagtgtgaaagaggatgtatcagtc 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 atcccctttcccaacctgaactgcctggttggactcagtgtgaaagaggatgtatcagtc 771
Query: 296 tccttggactacatgaccaaaggtatccaaaaggttattccctttctctgaagaccttga 355
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 tccttggactagatgaccaaaggtatccaaaaggttattccctttctctgaagaccttga 711
Query: 356 gagtgggcaattggagggggcaattagaagggacaattggtgggggcaattggaatggca 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gagtgggcaattggagggggcaattagaagggacaattggtgggggcaattggaatggca 651
Query: 416 attggctgagat-tttttttttaaactggaaagaaagaaaagagtggggcatgtgtttag 474
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 attggctgagatatttttttttaaactggaaagaaagaaaagagtggggcatgtgtttag 591
Query: 475 aatgtaaagagaata 489
|||||||||||||||
Sbjct: 590 aatgtaaagagaata 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 890
Length adjustment: 10
Effective length of query: 479
Effective length of database: 880
Effective search space: 421520
Effective search space used: 421520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
