Query= MSMg01no236_f16.b1 MSMg01no236_f16.b1 CHROMAT_FILE:
MSMg01no236_f16.b1 PHD_FILE: MSMg01no236_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:54 2005
(198 letters)
>mm_chr3_84865815_84866411
Length = 597
Score = 340 bits (176), Expect = 3e-98
Identities = 191/196 (97%), Gaps = 1/196 (0%)
Strand = Plus / Minus
Query: 1 gtccccagttgcccaaacattttttttttaatctttgagacttcagtgcctttctgcttg 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtccccagttgcccaaaca-tttttttttaatctttgagacttcagtgcctttctgcttg 337
Query: 61 ggttaggagtcaaggaatatcctagtttggttgcgtggttcagccttctcgactttgtgt 120
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 336 ggttaggagtcaaggaatatcctagtttggttgtgtggttcagccttctctactttgtgt 277
Query: 121 agaagctgggaggttgcacaggtaacttctatgttgtgagactcttgggaacccccaatt 180
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 276 agaaactgggaggttgcacaggtaacttctatgttgtgagactcttgggaagccccaatt 217
Query: 181 tcataatttcttctca 196
||||||||||||||||
Sbjct: 216 tcataatttcttctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 597
Length adjustment: 8
Effective length of query: 190
Effective length of database: 589
Effective search space: 111910
Effective search space used: 111910
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no236_f16.g1 MSMg01no236_f16.g1 CHROMAT_FILE:
MSMg01no236_f16.g1 PHD_FILE: MSMg01no236_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:54 2005
(288 letters)
>mm_chr3_84714973_84715660
Length = 688
Score = 530 bits (274), Expect = e-155
Identities = 283/286 (98%)
Strand = Plus / Plus
Query: 1 agttgtcctcaggttggtagcagagatggtattgagctgagatttcacctcagcccaggt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 agttgtcctcaggttggtagcagagatggtattgagctgagatttcacttcagcccaggt 260
Query: 61 tgttctccctgaaatacccagtgaagcagtatttccaactttgggatctgcagactatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttctccctgaaatacccagtgaagcagtatttccaactttgggatctgcagactatgg 320
Query: 121 aatgaccataaacctaacatctgctttcaggtcctcagtgtcaccccactgtggtaagtt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 aatgaccataaacctaacatctgctttcaggtcctcagtgtcaccccactgtggcaagtt 380
Query: 181 taaatacacagtttcatagcgcaagcctgaggatcccctgggtccctgaattactgtgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaatacacagtttcatagcgcaagcctgaggatcccctgggtccctgaattactgtgtt 440
Query: 241 ggtgacttagttaatttgatagcctgtctaaacaattgattattta 286
|||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtgacatagttaatttgatagcctgtctaaacaattgattattta 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
