Query= MSMg01no236_p23.b1 MSMg01no236_p23.b1 CHROMAT_FILE:
MSMg01no236_p23.b1 PHD_FILE: MSMg01no236_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:42 2005
(515 letters)
>mm_chr3_74650260_74651174
Length = 915
Score = 955 bits (494), Expect = 0.0
Identities = 509/514 (99%)
Strand = Plus / Minus
Query: 1 tattcggttgtgtgccaaagtcgctcagtgaaagtgcacactacaaagaagtttatgtta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 714 tattcggttgtgtgccaaagtcgctcagtgaaagtgcacactacaaagaagtttatgtca 655
Query: 61 tccaggagatataagttcaatttcattgcctgctatgtagaccacggaaagacatagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tccaggagatataagttcaatttcattgcctgctatgtagaccacggaaagacatagaga 595
Query: 121 ctatgggggttcactttcttatcagtttgaaagaatgcctctcattggagaaattaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ctatgggggttcactttcttatcagtttgaaagaatgcctctcattggagaaattaattg 535
Query: 181 atgagtatgtgttttgatttatggctctattttctttactttttaaaaagccaacactta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 atgagtatgtgttttgatttatggctctattttctttactttttaaaaagccaacactta 475
Query: 241 gtaaaacattttcaagttagttttctgtaaatcaaagatctttaaactcattaaatctaa 300
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 474 gtaaaacattttcaagttagttttccgtaaatcaaatatctttaaactcattaaatctaa 415
Query: 301 aggctcaaagaaaacagagactactctgaaacatcatggacagaatattttctcccaact 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 414 aggctcaaagaaaacagagactactctgaaacatcatggacagaattttttctcccaact 355
Query: 361 tgaagggaacatgagctttctggccaagggcagatatggtctcctactaaaatcttattt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 354 tgaagggaacatgagctttctggccaagggcagatatggtctcctactaaaagcttattt 295
Query: 421 tctgacacagctagagaggaattatagctattattgttgtctgctatagcttatgtactg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tctgacacagctagagaggaattatagctattattgttgtctgctatagcttatgtactg 235
Query: 481 tacagccaagttttgtgaatctgtaacttgagat 514
||||||||||||||||||||||||||||||||||
Sbjct: 234 tacagccaagttttgtgaatctgtaacttgagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_p23.g1 MSMg01no236_p23.g1 CHROMAT_FILE:
MSMg01no236_p23.g1 PHD_FILE: MSMg01no236_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:42 2005
(234 letters)
>mm_chr3_74514371_74515006
Length = 636
Score = 406 bits (210), Expect = e-118
Identities = 229/236 (97%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 1 ttgtcttgaagaccattgtgtaatttaagagaaatagtgatcttagctaacttaaaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtcttgaagaccattgtgtaatttaagagaaatagtgatcttagctaacttaaaacta 260
Query: 61 agggag--aaaaaaaaagaagttgcactaggtgtcttattggaaaataccaagactgaag 118
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggagaaaaaaaaaaagaagttgcactaggtgtcttattggaaaataccaagactgaag 320
Query: 119 aaaagaagtcatatttggacaatgacatcctaatctaagagagagatgttgcagtttttc 178
| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 acaagaagacatatttggacaatggcatcctaatctaagagagagatgttgcagtttttc 380
Query: 179 tctctttggaagtttgcacatgtttgtatgattgagttctttcttgccccacaaca 234
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 tctctttgggagtttgcacatgcttgtatgattgagttctttcttgccccacaaca 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 636
Length adjustment: 9
Effective length of query: 225
Effective length of database: 627
Effective search space: 141075
Effective search space used: 141075
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
