Query= MSMg01no237_m07.b1 MSMg01no237_m07.b1 CHROMAT_FILE:
MSMg01no237_m07.b1 PHD_FILE: MSMg01no237_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:40 2005
(606 letters)
>mm_chr3_39616482_39617487
Length = 1006
Score = 1104 bits (571), Expect = 0.0
Identities = 580/583 (99%)
Strand = Plus / Minus
Query: 1 caagaaccagaaactcttaaagtcaactgagcctttgctttttacagcatactgaggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 583 caagaaccagaaactcttaaagtcaactgagcctttgctttttacagcatagtgaggagg 524
Query: 61 gggaatagtctggatccaggctattccacaatctaggaaggactactgcatggatacgtt 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gagaatagtctggatccaggctattccacaatctaggaaggactactgcatggatacgtt 464
Query: 121 cacaagtgttgatacagttctatatagcaccctgaggtatgagaaggctagaaaagcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cacaagtgttgatacagttctatatagcaccctgaggtatgagaaggctagaaaagcatt 404
Query: 181 gaagaggaacatgttcctttaagacagcagcttatgaaattggaactgggaactacagga 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gaagaagaacatgttcctttaagacagcagcttatgaaattggaactgggaactacagga 344
Query: 241 ctctgattactgaccaaaggacctgagtggtatccttcatcatgggtgaacatatatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ctctgattactgaccaaaggacctgagtggtatccttcatcatgggtgaacatatatgat 284
Query: 301 aagatttctaggaaagaacaaggccatgccactgaccccctaaccacccttaagagttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aagatttctaggaaagaacaaggccatgccactgaccccctaaccacccttaagagttaa 224
Query: 361 tctcaaagggcctgtcaatcatctatagccctggctatcctggaactcactttgtagacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tctcaaagggcctgtcaatcatctatagccctggctatcctggaactcactttgtagacc 164
Query: 421 aggctggcctcaaactcagaaatctgcctgcctctgcctcccgagtgctgagattaaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 aggctggcctcaaactcagaaatctgcctgcctctgcctcccgagtgctgagattaaagg 104
Query: 481 cgtgcaccaccatgcctggcttggcagaattctacaaagccctgcctctggacactgtcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 cgtgcaccaccatgcctggcttggcagaattctacaaagccctgcctctggacactgtcc 44
Query: 541 atgcttgcccctctgggccctatattgtagtccctctgggccc 583
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 atgcttgcccctctgggccctatattgtagtccctctgggccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_m07.g1 MSMg01no237_m07.g1 CHROMAT_FILE:
MSMg01no237_m07.g1 PHD_FILE: MSMg01no237_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:40 2005
(357 letters)
>mm_chr3_39433014_39433763
Length = 750
Score = 609 bits (315), Expect = e-179
Identities = 344/357 (96%), Gaps = 7/357 (1%)
Strand = Plus / Plus
Query: 1 ttggcttcagctgttcagttctgtctcagccatctacaccttacctctaagtagtcattc 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggcttcagctgttcagttctgcctcagccatctacaccttacctctaagtagtcattc 260
Query: 61 ttgatcctcaactgcctgttttaccataatgaggaaaacatcattccttccaagataaat 120
||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 261 ttgatcctcaa-----tgttttaccattatgaggaaaacattattccttccaagataaat 315
Query: 121 tacttaattagtctaaaaggttttttttttctatcagtttgtccaacttttatgttcccc 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 316 tacttaattagtctaaaaggtttttttt--ctatcagtttgtccaacttttatgttcccc 373
Query: 181 tattgatgggctgacaactttcaagcttgtagatcatgaaccagaaactgatacttaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tattgatgggctgacaactttcaagcttgtagatcatgaaccagaaactgatacttaaga 433
Query: 241 gagtgctagcactgaacaccatctagcataatcaaaatagcatcctggcaagattggcga 300
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 434 gagtgctcgcactgaacaccatctagcataatcaaaatagaatcctggcaagattggcaa 493
Query: 301 tcaatcaatcagtgtggggctgagaacgaaggaagcacaaagcaaatgcctttgtct 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tcaatcaatcagtgtggggctgagaacgaaggaagcacaaagcaaatgcctttgtct 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 750
Length adjustment: 9
Effective length of query: 348
Effective length of database: 741
Effective search space: 257868
Effective search space used: 257868
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
