CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTCAGTTCTGAGCCCCATTTTTTTAATGGGGTTATTTGATTT
TCTGAAGTCCACCTTCTTGACCTCTTTATATATGTTGGATATTAGTCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTT
TTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCAT
TAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC
TGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCGAGGCTTTTCCCCACT
TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGAT
CCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCAATTTGCA
TTCTTCTACACGATAAAAACCAGTTGTGCCAGCACCAATTGTTGAAAATG
CTCTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTCTCGAAGATCAAGTG
ACTATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGT
CTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCT
CTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCCACCAGAGGTTCTTTT
ATCCTTGAGAAGAGTTTTTGCTATCCTAGGTTTTTTGTTATT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAAAATATATTAAGATTTTTGAGA
GCAGAATATTTAGATTCTGATAGCCAATGTCACTTTTTGGTATGCAAATT
TCCTTATAAAAACACTCATGATTTTAATCTCCCCAATTCAGTCTCCTCTG
CCCAGTGGAAAAAAAGAAACTACTATCAGCAGAAATTTCTAAGATATGAA
TGTGGCATTTTGAAAGCTCTGTAGTTCCTGATCTAGTTGTAATTGATACT
CTGTGAAACTAAAGGTCACTATTTGTGTTCTAAATAGTAGAAACTATCTT
TTATAAAATGTAAGGCACAATAAATTAAGTCCAAAGTAGCATTTCTAATT
TGCTGCCTAAGATAATAAAATATGAGTCAAGTGTGGAAAGCAGCTATACA
TTGACCTTGTATGGTATGCAGCACAGGGATGTGCAGTTCACACTGTGATC
TTTGGGATAATTGCTTGTACAGGACTGATATCCCCACCTTTACATATGTC
TATGAAATTCACACCTTTAGGTGTCAGTCTGCAATTTCCTCAGGAGATAC
TCTTTTCTCAATTTTTAAAATCTTAAACCAACAGGCAAGTTCTAGCTTTA
ACCTGAAATTCCACTATCATTGATCATCTAAGACTTCTCAATTTTTCCAT
TAATCTTTTGTCTACTGTTTGTTTAAGAGCACTGCTAGCTCTTCAAGA

Query= MSMg01no237_m15.g1 MSMg01no237_m15.g1 CHROMAT_FILE:
MSMg01no237_m15.g1 PHD_FILE: MSMg01no237_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:42 2005
         (672 letters)



>mm_chr3_77805306_77806378
          Length = 1073

 Score = 1270 bits (657), Expect = 0.0
 Identities = 669/673 (99%), Gaps = 1/673 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaaatatattaagatttttgagagcagaatatttagattctgatagccaatgtcacttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 caaaatatattaagatttttgagagcagaatatttagattctgatagccaatgtcacttt 814

                                                                       
Query: 61  ttggtatgcaaatttccttataaaaacactcatgattttaatctccccaattcagtctcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 ttggtatgcaaatttccttataaaaacactcatgattttaatctccccaattcagtctcc 754

                                                                       
Query: 121 tctgcccagtggaaaaaaagaaactactatcagcagaaatttctaagatatgaatgtggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tctgcccagtggaaaaaaagaaactactatcagcagaaatttctaagatatgaatgtggc 694

                                                                       
Query: 181 attttgaaagctctgtagttcctgatctagttgtaattgatactctgtgaaactaaaggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 attttgaaagctctgtagttcctgatctagttgtaattgatactctgtgaaactaaaggt 634

                                                                       
Query: 241 cactatttgtgttctaaatagtagaaactatcttttataaaatgtaaggcacaataaatt 300
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cattatttgtgttctaaatagtagaaactatcttttataaaatgtaaggcacaataaatt 574

                                                                       
Query: 301 aagtccaaagtagcatttctaatttgctgcctaagataataaaatatgagtcaagtgtgg 360
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 573 aagtccaaagtagcatttctaatttgctacctaagataataaaatatgagtcaagtgtgg 514

                                                                       
Query: 361 aaagcagctatacattgaccttgtatggtatgcagcacagggatgtgcagttcacactgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aaagcagctatacattgaccttgtatggtatgcagcacagggatgtgcagttcacactgt 454

                                                                       
Query: 421 gatctttgggataattgcttgtacaggactgatatccccacctttacatatgtctatgaa 480
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 453 gatctttgggataattgcttgtacaggcctgatatccccacctttacatatgtctatgaa 394

                                                                       
Query: 481 attcacacctttaggtgtcagtctgcaatttcctcaggagatactcttttctcaattttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 attcacacctttaggtgtcagtctgcaatttcctcaggagatactcttttctcaattttt 334

                                                                       
Query: 541 aaaatcttaaaccaacaggcaagttctagctttaacctgaaattccactatcattgatca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aaaatcttaaaccaacaggcaagttctagctttaacctgaaattccactatcattgatca 274

                                                                       
Query: 601 tctaagacttctcaatttttccattaatcttttgtctac-tgtttgtttaagagcactgc 659
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 273 tctaagacttctcaatttttccattaatcttttgtctacttgtttgtttaagagcactgc 214

                        
Query: 660 tagctcttcaaga 672
           |||||||||||||
Sbjct: 213 tagctcttcaaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1073
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1063
Effective search space:   703706
Effective search space used:   703706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)