NNTTCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAATCCG
CGGAATTCTTGTCTCATTACCAGCTTGAACTAATCCCTATTTAAGAAATA
GACACAAGGAAAAGGCTGAAACTGTAATGCAGAAATTTCCTATCATAAAT
CTGAATCTTTTGTCTGTCCTCACTGTCAAAGGTCCATTCTACAGCCACAA
GAAGTAATATGAAATGCTAGAGAGAAGGATTTGGGAAGTTGCACAGTTCC
TAGAGCATTTGCCTACCATTCATGCAGCCCTGGGTTCGATAGCAATTCGT
GAACTAACAGCGTAGGGTGTGTCTGTAATTCTAGAACACAAGGAGGAGGA
GGTAGGACAATTGGAAACTCAAAGTCATCTATCTGTAACTCTGTGATGAA
TTTGAGGCCTTCCTGCACTACATAAAAATACTTAAAAGCCTTACACACAC
ACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAT
GCAAATAACTTATTTAGTTAAAAATACCAGTTCACAAACAGAGCGTAGTG
CATAGCCTGGGTTTTCTGGTTTGCCTATTTAAACTGTACAAGTCCTGGCC
TGTTGTCAGTAGACTGTTCTTCACATCTACGACTACTGAGATTTCCAAAT
GTCAGGAAACGTTTTTTTCTGAGCCTTATTATAGCAGCTTTCCATTAGAA
CCAAACTGATATATTTACTTTGCTCTTGGAAAACAGCATCTGTATTT

CCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCA
TGAATGGGTGTTGGACCTTGTCAAATGCTTTTTCTGCATCTAGTGAGATG
ATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGAT
GGATTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTATTT
GGTCAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGA
ATTTTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAA
GTTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATAG
TGGCTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGA
AATAGTTTGTGCAGAATTGGAATTAGATCTTCTTTGAAGGTCTGATAGAA
CTCTGTACTAAACCCATCTGGTCCTGGGCTTTTTTTGGTTGGGAGACTAT
TAATAACTGCTTCTATTTCTTTAGGTGATATGGGACTGTTTAGATGGTCA
ACTTGATCCTGATTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTC
CATTTCGTCCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGG
ATCTGATGGTGTTCTGGATTTCTTCAGGACCTGTTGCTATGN

Query= MSMg01no260_m24.b1 MSMg01no260_m24.b1 CHROMAT_FILE:
MSMg01no260_m24.b1 PHD_FILE: MSMg01no260_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:01 2005
         (623 letters)



>mm_chr3_82260960_82261983
          Length = 1024

 Score =  654 bits (338), Expect = 0.0
 Identities = 377/400 (94%), Gaps = 17/400 (4%)
 Strand = Plus / Minus

                                                                        
Query: 241  ggtgtgtctgtaattctagaacacaaggaggaggaggtaggacaattggaaactcaaagt 300
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1024 ggtgtgtctgtaattctagaacacaaggaggaggaggtgggacaattggaaactcaaagt 965

                                                                        
Query: 301  catctatctgtaactctgtgatgaatttgaggccttcctgcactacataaaaatacttaa 360
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964  catctatctgtagctctgtgatgaatttgaggccttcctgcactacataaaaatacttaa 905

                                                                        
Query: 361  aagccttacacacacacacacac----------------agagagagagagagagagaga 404
            || ||||||||||||||||||||                |||||||||||||||||||||
Sbjct: 904  aaaccttacacacacacacacacacacacacagagagagagagagagagagagagagaga 845

                                                                        
Query: 405  gagagagagagagagagagatgcaaataacttatttagttaaaaataccagttcacaaac 464
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 844  gagagagagagagagagagatgcaaataacttatttagttaaaaacaccagttcacaaac 785

                                                                        
Query: 465  agagcgtagtgcatagcctgggttttctggtttgcctatttaaactgtacaagtcctggc 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 784  agagcgtagtgcatagcctgggttttctggtttgcctatttaaactgtacaagtcctggt 725

                                                                        
Query: 525  ctgttgtcagtagactgttcttcacatctacgactactgagatttccaaatgtcaggaaa 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724  ctgttgtcagtagactgttcttcacatctacgactactgagatttccaaatgtcaggaaa 665

                                                    
Query: 585  cg-tttttttctgagccttattatagcagctttccattag 623
            || ||||||||||||||||| |||||||||||||||||||
Sbjct: 664  cgttttttttctgagccttagtatagcagctttccattag 625


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1024
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1014
Effective search space:   621582
Effective search space used:   621582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)