XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTCTCAATCTCCCGGACAAATAAAAATTGGAGAATGGCTTATCCCAAGA
CAGCTCCAAAATGTGTTATTAAAAGTATGCAACAGTCACTGTTTCTGTCA
TGCAGTTCACTGCAAAAATCAATTTTGTGTTGTTAAAGATAGCAAAATCC
TCTAGAAGGGATTACTACAGTAGGTCCAAAGTCACAAATATGTTTATGCA
TGATCTTTTATGGAGGACTTGTCTTAGCCATGGTTGTTTATCAAATAGAA
TTGTAGAAAAAAGATCTCTTTAATAATAAAATATCCTGACTACAAACTCC
AGGACTTCTCTTGCACAGAAAATGTTCACTGTATTTTAAATATATGCTTC
AGTCAGCATGACAATGTATCTCAGTTCTGGATCTTAGAGGTTTTATCAAG
TTAGTACAATATGTCAACATGTCTATAATCAATACAAAAATGAAATTCAC
ATACCTTTGTAAAATAATCCATTATAAAAACAATAAATGAGTTTAACATA
ATAATTGGGAAGGCCTATGCCAATAGTTGTAGTTTGTAAACTAAATAATA
AAAATATACCATGCAAAATATGCAAATAATAGATAATATTAATAATGTCA
TTAGTAGATAATACATAGAAATAACTTGAATCTTCAATTGCTAATAAACG
AATAAATCACAGTACACTGATACTGAAGAAAATTACTCAAAAGTGTGGCG
TATTTTTTTTAN

NTTCGATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGGGAGGCTTTCTGCCTGTTGGG
ACAGTGGCCTTGCATTTGTCACAGCCCCCAGAAGTTCTTCAGACTGTGGT
ATCTGTTTCCCAGTTGCCCTTTATATAGAGGAGCTCCTGGGATGCCTTCA
AGCTGTGGTTTCTTCAGGGGAGCAGATAAGCTGGAGATCAGTTGCAGTGT
TGTCTTGTATGTAGCAGATCTCCTGCTATACCAGTTATCCTGTATGCAGC
AGATCTCCTCAGATGTCTCATATCTTAGTGTTAGTTGTCCTGTGGGCAAT
GAATCCTCTGGAATGCATCAGGCTGTGGTGTCAGTTACCCTGAGTACAGT
GGATCTTCTGGGCTGGCTCAGGATATAGTGTGTCCATGGGAGCAGACTTG
CTAGAGGTCTTCCCCAGCAGAAAGGCAGCAAAACTTTTCTTTTTGAAACA
ATCATCAAAGACTTTACTTTAAGTTTTGAATTATGTTTAAACATTAAGAA
ACACATGCCAAATATCCATTTTTGACAGGTAATTTCTTTTAAAAAGGAAG
AAAAAAATCGCTGCTGAAGAATCTCTATCATTTGAAGCTAATTAAGTACC
TAAGTACCTTATTCCTGACATTTACCCCCCTATTAAATGTACATTTAGTC
TCTACGTTTCATGTTTTACCCAGCTATTTCAAAG

Query= MSMg01no261_g09.b1 MSMg01no261_g09.b1 CHROMAT_FILE:
MSMg01no261_g09.b1 PHD_FILE: MSMg01no261_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:47 2005
         (694 letters)



>mm_chr3_5669682_5670775
          Length = 1094

 Score = 1297 bits (671), Expect = 0.0
 Identities = 686/691 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcttctcaatctcccggacaaataaaaattggagaatggcttatcccaagacagc 63
           ||||||||||||||||||  || ||||||| |||||||||||||||||||||||||||||
Sbjct: 894 ggaattcttctcaatctcaagggcaaataagaattggagaatggcttatcccaagacagc 835

                                                                       
Query: 64  tccaaaatgtgttattaaaagtatgcaacagtcactgtttctgtcatgcagttcactgca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 tccaaaatgtgttattaaaagtatgcaacagtcactgtttctgtcatgcagttcactgca 775

                                                                       
Query: 124 aaaatcaattttgtgttgttaaagatagcaaaatcctctagaagggattactacagtagg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 aaaatcaattttgtgttgttaaagatagcaaaatcctctagaagggattactacagtagg 715

                                                                       
Query: 184 tccaaagtcacaaatatgtttatgcatgatcttttatggaggacttgtcttagccatggt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tccaaagtcacaaatatgtttatgcatgatcttttatggaggacttgtcttagccatggt 655

                                                                       
Query: 244 tgtttatcaaatagaattgtagaaaaaagatctctttaataataaaatatcctgactaca 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tgtttatcaaatagaattgtagaaaaaagatctctttaataataaaatatcctgactaca 595

                                                                       
Query: 304 aactccaggacttctcttgcacagaaaatgttcactgtattttaaatatatgcttcagtc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aactccaggacttctcttgcacagaaaatgttcactgtattttaaatatatgcttcagtc 535

                                                                       
Query: 364 agcatgacaatgtatctcagttctggatcttagaggttttatcaagttagtacaatatgt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 agcatgacaatgtatctcagttctggatcttagaggttttatcaagttagtacaatatgt 475

                                                                       
Query: 424 caacatgtctataatcaatacaaaaatgaaattcacatacctttgtaaaataatccatta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 caacatgtctataatcaatacaaaaatgaaattcacatacctttgtaaaataatccatta 415

                                                                       
Query: 484 taaaaacaataaatgagtttaacataataattgggaaggcctatgccaatagttgtagtt 543
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 414 taaaaacaataaatgagtttaacataataattgggaaggcctatgccaatagatgtagtt 355

                                                                       
Query: 544 tgtaaactaaataataaaaatataccatgcaaaatatgcaaataatagataatattaata 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tgtaaactaaataataaaaatataccatgcaaaatatgcaaataatagataatattaata 295

                                                                       
Query: 604 atgtcattagtagataatacatagaaataacttgaatcttcaattgctaataaacgaata 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 atgtcattagtagataatacatagaaataacttgaatcttcaattgctaataaacgaata 235

                                          
Query: 664 aatcacagtacactgatactgaagaaaatta 694
           |||||||||||||||||||||||||||||||
Sbjct: 234 aatcacagtacactgatactgaagaaaatta 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space:   741456
Effective search space used:   741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)