Query= MSMg01no262_g04.b1 MSMg01no262_g04.b1 CHROMAT_FILE:
MSMg01no262_g04.b1 PHD_FILE: MSMg01no262_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:01 2005
(296 letters)
>mm_chr3_152227772_152228467
Length = 696
Score = 511 bits (264), Expect = e-149
Identities = 288/296 (97%), Gaps = 1/296 (0%)
Strand = Plus / Minus
Query: 2 gggg-aactccataaaactgtcctccaaccaccaaatacagagtgggaactgtgcaccac 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 496 ggggtaactccataaaactgtcctccaaccaccaaatacagagtgggaactgtgcgccac 437
Query: 61 cacataccacggcatgcacaaaaataaatcatgttctattcaaaaaagataaaaagacaa 120
|||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 436 cacacgccacggcatgcacaaaaataagtcatgttctattcaaaaaagataaaaagacaa 377
Query: 121 aatccaatgcttacagttcagttccagggaaacaaaaaggcaaagttatctcatagaatt 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 376 aatccaatgcttacagtttagttccagggaaacaaaaaggcaaagttatctcagagaatt 317
Query: 181 agtgaagaaaagtgtctattttctgggcaagagattcagtttaatttatgctaaaactag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 agtgaagaaaagtgtctattttctgggcaagagattcagtttaatttatgctaaaactag 257
Query: 241 taataaattcacatattcatatattaaaagcaaccttccacccctccttatgaaag 296
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 256 taataaattcacatattcatatattaaaagtaaccttccacccctccttatgaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no262_g04.g1 MSMg01no262_g04.g1 CHROMAT_FILE:
MSMg01no262_g04.g1 PHD_FILE: MSMg01no262_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:01 2005
(341 letters)
>mm_chr3_152080189_152080929
Length = 741
Score = 549 bits (284), Expect = e-161
Identities = 284/284 (100%)
Strand = Plus / Plus
Query: 1 tttgcaatgaagattagttttcagatttgctgttgaatgcttgaatagcccatgaatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgcaatgaagattagttttcagatttgctgttgaatgcttgaatagcccatgaatttt 260
Query: 61 attagtacagaaaaacaaccaaagctttgtagcaaggatcgaataaaataaggcttgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attagtacagaaaaacaaccaaagctttgtagcaaggatcgaataaaataaggcttgttt 320
Query: 121 ctattttgtgcctttaggaaacaaatagctgtttttaagcacctagaagatatagttact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctattttgtgcctttaggaaacaaatagctgtttttaagcacctagaagatatagttact 380
Query: 181 aaaataagagaattcaaatgaaaatgttgtatttgttataactcaaaagtattttctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaataagagaattcaaatgaaaatgttgtatttgttataactcaaaagtattttctctg 440
Query: 241 cttctgaaggtaatctagcaattgtgtgtgtgtgcctgtgtgtg 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttctgaaggtaatctagcaattgtgtgtgtgtgcctgtgtgtg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
