Query= MSMg01no263_a07.b1 MSMg01no263_a07.b1 CHROMAT_FILE:
MSMg01no263_a07.b1 PHD_FILE: MSMg01no263_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:49 2005
(198 letters)
>mm_chr3_112976844_112977439
Length = 596
Score = 329 bits (170), Expect = 8e-95
Identities = 191/198 (96%), Gaps = 2/198 (1%)
Strand = Plus / Plus
Query: 1 aattctccaagaggacattcattaaccaaggtttttgctctttctaatgtaccgccactc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 201 aattctccaagaggacattcattaaccaaggtttttgctctttctaatgtacag-tactc 259
Query: 61 ataagtaaataaaacgtactaggaataaactcagtgggcaaaaagagatagcccctgctc 120
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtaag-aaataaaatgtactaggaataaactcagtgggcaaaaagagatagcccctgctc 318
Query: 121 cagttgataggcaaacacataaagaacaagttttatatatgttaaatttgaatagggtgc 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 319 cagttgataggcaaacacataaaaaacaagttttatatatgttaaatttgaatagggtgc 378
Query: 181 ctaggtccattgcatgtg 198
||||||||||||||||||
Sbjct: 379 ctaggtccattgcatgtg 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 596
Length adjustment: 8
Effective length of query: 190
Effective length of database: 588
Effective search space: 111720
Effective search space used: 111720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no263_a07.g1 MSMg01no263_a07.g1 CHROMAT_FILE:
MSMg01no263_a07.g1 PHD_FILE: MSMg01no263_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:49 2005
(535 letters)
>mm_chr3_113325044_113325978
Length = 935
Score = 992 bits (513), Expect = 0.0
Identities = 525/529 (99%)
Strand = Plus / Minus
Query: 1 atgctaacccttttaatgtaagatccaatcttactagaataaaaaatttaggagatgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 atgctaacccttttaatgtaagatccaatcttactagaataaaaaatttaggagatgagg 646
Query: 61 gtgaaagaggtaaggcctgtaagtctgtaattttggggagatgcataaaaagctaagtac 120
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 645 gtgaaagaggtaaggcctgcaagtctgtaattttggggagatacataaaaagctaagtac 586
Query: 121 cctaaaacccttatagtgtaacctgtatttagtttcttatgaccatttggaattatcata 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 585 cctaaaacccttatagtgtaacctgcatttagtttcttatgaccatttggaattatcata 526
Query: 181 ccatgttcataaagtataaggactaagtagtttaattgtactcttccttctcagccatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ccatgttcataaagtataaggactaagtagtttaattgtactcttccttctcagccatgc 466
Query: 241 tgtgtgaggagtcctttaaggttttctgtttttctaataacattgtcttcataatgtcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tgtgtgaggagtcctttaaggttttctgtttttctaataacattgtcttcataatgtcat 406
Query: 301 gtttgagaagattattattttctatatacagtatttcacttatttgaaagacaagatgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gtttgagaagattattattttctatatacagtatttcacttatttgaaagacaagatgat 346
Query: 361 ctgtgattttgtatgctctaggttggatgacactgtggaaaatgataaagagaagaaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ctgtgattttgtatgctctaggttggatgacactgtggaaaatgataaagagaagaaaga 286
Query: 421 acctgacattttaacagtagaaaatggaattgcaccaaatcatgggtttgcattttgtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 acctgacattttaacagtagaaaatggaattgcaccaaatcatgggtttgcattttgtta 226
Query: 481 atttttttattttgcctttgttgcagtgtgtgtgtgtgtgtgtgtgtgt 529
||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 225 atttttttattttgcctttgttgcagtgtgtgtatgtgtgtgtgtgtgt 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
