CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCTGTATGCTACCGAATGGCAGAGAAGCACTTGAAAAAATGTT
CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
CACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAG
ATGCTGGCGAGGATGTGGAGAAAGAGGAACTCTCCTCCATTGTTGGTGGG
AGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGA
AAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCAT
ATATCCAGAAGATGCCCCAACAGGTAACAAGGACACATGCTCCACTATGT
TCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGC
CCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGA
GTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAAT
GGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGA
AACTCACACAATATGTATTCACTGATAAGTGGATATTAGCCCCAAACCTA
GGATACCCAAGATATAAGATATAATTTGCTAAACACATGATACTCAAGAA
GAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGATTTGGGAACA
AAAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATGCAGAAGAGGTCACTAGGGCAT
AATAATCGAAATGATCTTTTTAAGGGAATTTTTACAGTGGCAGGTATCAA
GACAATTTAATAAAACTCTCAGTCCTGAAATTCACATGGAAAAGATTGCT
GTTTCTCTCCCTTTTAACGACTAATTCACTCACTGTGTAGTTATAAGTCT
CCCACAATATTTTCTCACTCAGAGAATTTAAAATCCACCTGGGGATCCAC
CCCATAATCAGCCACCAATCCCAGACACTATTGAATATGTCAGTAAGATT
TTGCTAACAGGACCCTAATATAGCTGTCTCTTCTGAGGCTATGCCAGTGC
CTGGCAAATACAGAAGTTGATGCTCACAGTCATCTATTGAATGGAACACA
GGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTGAAGGGATC
TGCAACCCTATAGGAGAAACAAAAATATGAACTAACCAGTACCCCCCCAG
AGCTTGTGTCTCTAGCTGCATATGTAGCAGAAGATGGCCTCGTCAGCCAT
CATTGGGAGGAGAGGCCCTTGGTCTTGCAAACTTTATATGCCCCAGTACA
GGGGAATGCCAGGGCCAGGAAGCAGGAATGGGTGGGTTGGGGAGCAGGNG
GTTNNNTTTTTTTTNTNTTTTTTTTTTTTTTTNTNTTTTTTTATG

Query= MSMg01no263_d12.g1 MSMg01no263_d12.g1 CHROMAT_FILE:
MSMg01no263_d12.g1 PHD_FILE: MSMg01no263_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:04 2005
         (623 letters)



>mm_chr3_77214991_77216013
          Length = 1023

 Score = 1131 bits (585), Expect = 0.0
 Identities = 612/621 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcagaagaggtcactagggcataataatcgaaatgatctttttaagggaatttttaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 atgcagaagaggtcactagggcataataatcgaaatgatctttttaaggaaatttttaca 260

                                                                       
Query: 61  gtggcaggtatcaagacaatttaataaaactctcagtcctgaaattcacatggaaaagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggcaggtatcaagacaatttaataaaactctcagtcctgaaattcacatggaaaagat 320

                                                                       
Query: 121 tgctgtttctctcccttttaacgactaattcactcactgtgtagttataagtctcccaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctgtttctctcccttttaacgactaattcactcactgtgtagttataagtctcccaca 380

                                                                       
Query: 181 atattttctcactcagagaatttaaaatccacctggggatccaccccataatcagccacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atattttctcactcagagaatttaaaatccacctggggatccaccccataatcagccacc 440

                                                                       
Query: 241 aatcccagacactattgaatatgtcagtaagattttgctaacaggaccctaatatagctg 300
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 aatcccagacactattgaatatgtcagtaagattttgctgacaggaccctaatatagctg 500

                                                                       
Query: 301 tctcttctgaggctatgccagtgcctggcaaatacagaagttgatgctcacagtcatcta 360
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 tctcttctgaggctatgccagtgcctggcaaatacagaagtggatgctcacagtcatcta 560

                                                                       
Query: 361 ttgaatggaacacagggcccccaatggaggagctagagaaagtacccaaggagctgaagg 420
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 ttgaatggaacacagggcccccaatggaggagctggagaaagtacccaaggagctgaagg 620

                                                                       
Query: 421 gatctgcaaccctataggagaaacaaaaatatgaactaaccagtacccccccagagcttg 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 gatctgcaaccctataggagaaacaaaaatatgaactaaccagtacccccccagagctcg 680

                                                                       
Query: 481 tgtctctagctgcatatgtagcagaagatggcctcgtcagccatcattgggaggagaggc 540
            ||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||
Sbjct: 681 cgtctctagctgcatatgtagcagaagatggcctagtcggccatcattggaaggagaggc 740

                                                                       
Query: 541 ccttggtcttgcaaactttatatgccccagtacaggggaatgccagggccaggaagcagg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccttggtcttgcaaactttatatgccccagtacaggggaatgccagggccaggaagcagg 800

                                
Query: 601 aatgggtgggttggggagcag 621
           |||||||||||||||||||||
Sbjct: 801 aatgggtgggttggggagcag 821


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space:   620969
Effective search space used:   620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)