Query= MSMg01no264_p23.b1 MSMg01no264_p23.b1 CHROMAT_FILE:
MSMg01no264_p23.b1 PHD_FILE: MSMg01no264_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:20 2005
(237 letters)
>mm_chr3_108412365_108413002
Length = 638
Score = 437 bits (226), Expect = e-127
Identities = 232/234 (99%), Gaps = 1/234 (0%)
Strand = Plus / Minus
Query: 1 tagcctaaataaataggaacaaggaagaacttagtcctgtagttttatgaggaagtttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tagcctaaataaataggaacaaggaagaacttagtcctgtagttttatgaggaagtttaa 375
Query: 61 tcgcctagaaatgagaatgttgcttgggaat-tttagtacattgtttcacagtgaaatta 119
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 374 tcgcctagaaatgagaatgttgcttgggaatgtttagtacattgtttcacagtgaaatta 315
Query: 120 actatcaaaactgagtcattctttaatgtgttaaaaatatggctcatggttttaaaagta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 actatcaaaactgagtcattctttaatgtgttaaaaatatggctcatggttttaaaagta 255
Query: 180 ctaatctgtgagaaattcccactggagtagtgacattaaattttgaggtctgaa 233
|||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctaatctgtgagaaatacccactggagtagtgacattaaattttgaggtctgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 638
Length adjustment: 9
Effective length of query: 228
Effective length of database: 629
Effective search space: 143412
Effective search space used: 143412
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_p23.g1 MSMg01no264_p23.g1 CHROMAT_FILE:
MSMg01no264_p23.g1 PHD_FILE: MSMg01no264_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:20 2005
(129 letters)
>mm_chr3_108252565_108253093
Length = 529
Score = 199 bits (103), Expect = 4e-56
Identities = 121/127 (95%)
Strand = Plus / Plus
Query: 1 tcttccccttctttgctctgactatcttttccttctcctgtttagccctctccagcactg 60
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 201 tcttccccttctttgctctgactagcttttccttctcctgggaagccctctccagcactg 260
Query: 61 tctgtcctgtctcccagactggttagatacctttctggtttcccaagacactttggtttt 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 tctgtcctgtctcccagactggttagatacctttctggtttcctaagacactttggtttt 320
Query: 121 gtttttt 127
||||||
Sbjct: 321 atttttt 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 529
Length adjustment: 8
Effective length of query: 121
Effective length of database: 521
Effective search space: 63041
Effective search space used: 63041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
