XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTGCATGCTGCTTTAGGTCTAAGTCTTTCCAAAACAACAACCAATGTTTC
AAAGTGAAAATGTTACAAGTCTGCAGCTTACAAAGGACTTCATCTCCTTA
GTAGCATTGCACTAACTTAAGTCTGGCTCCACCTTCCAAACCTTTCTTAA
ACAATGTAACAAACTGCTTACTGTTCTTAGCAAGTCAGAAATGGAATAGA
GAGGCTAGCAGGTTCCTTGAGTGGTTGCTTATAGTCACTGGATGAATGGA
ATGTCTTGTGCTCGGTTCTATCCACCACTCCTCATGTGGGGATATCAGGT
CTGTATGCAGACACCCTTACTTCCCTGTCTTCCAATCAAGCCGAGATTGC
ATCAGGAGGGAAGAAAACAAATAAGTACAAGGAAAAACATATCAAATGCC
CTGAGTTCTGCTACTTGAGTCATAAATACTTAGAGGAACAGAAACAATGT
AGCAGTCATGAACCTGTGAGCCCAGTACTTAGAAGGTGGAGATAGAAAGG
GCAAGCACTGGAAACCAGCCTGTGCTATAAGCTATGTAGTGAGTTGAAAT
CCTGTCTTTAGTTATTTAGTAGACTATTGACTCAAAATATCAGAATAAAA
TGATCTGGATTATGTTGTATATAAAATAATGTGTTTTGATGTGTTACATA
TATCCCAGTCTTTGCATTAATCTCATA

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGC
ACTTGAAAAAATGTTCAACCTCCTTAATCATCAGGGAAATGCAAATCAAA
ACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAA
TTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCC
TCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTC
TGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGCAAT
ACCTCTCCTGTTTTTATATCCAGAAGAGGCCCCAACAGGTAAGAAGGACA
CATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGG
AAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTA
CATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGA
AGTTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA
ACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAAGTGGATA
TTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGTTAAACA
CATGAAACTCAAGAAGAATGAAGACTGANGT

Query= MSMg01no269_k10.b1 MSMg01no269_k10.b1 CHROMAT_FILE:
MSMg01no269_k10.b1 PHD_FILE: MSMg01no269_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:09 2005
         (651 letters)



>mm_chr3_135775559_135776609
          Length = 1051

 Score = 1081 bits (559), Expect = 0.0
 Identities = 619/649 (95%), Gaps = 18/649 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgcatgctgctttaggtctaagtctttccaaaacaacaaccaatgtttcaaagt 64
           |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 205 gaattctgcatgctgctttaggtctaagtctttcaaaaacaacaacaaatgtttcaaagt 264

                                                                       
Query: 65  gaaaatgttacaagtctgcagcttacaaaggacttcatctccttagtagcattgcactaa 124
           ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 265 gaaaatgttacaagtatgcagcttacaaaagacttcatctccctagtagcattgcactaa 324

                                                                       
Query: 125 cttaagtctggctccaccttccaaacctttcttaaacaatgtaacaaactgcttactgtt 184
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 cttaagtctggctccaccttccaaacctttctcaaacaatgtaacaaactgcttactgtt 384

                                                                       
Query: 185 cttagcaagtcagaaatggaatagagaggctagcaggttccttgagtggttgcttatagt 244
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttagcaagtcagaaatgggatagagaggctagcaggttccttgagtggttgcttatagt 444

                                                                       
Query: 245 cactggatgaatggaatgtcttgtgctcggttctatccaccactcctcatgtggggatat 304
           ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 cactggatgaacggaatgtcttgtgctcggttctatccgccactcctcatgtggggatat 504

                                                                       
Query: 305 caggtctgtatgcagacacccttacttccctgtcttccaatcaagccgagattgcatcag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caggtctgtatgcagacacccttacttccctgtcttccaatcaagccgagattgcatcag 564

                                                                       
Query: 365 gagggaagaaaacaaataagtacaaggaaaaacatatcaaatgccctgagttctgctact 424
           |||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct: 565 gagggaagaaaacaaataagtacaaggaaaaacatatcaaatgccctgagt--------- 615

                                                                       
Query: 425 tgagtcataaatacttagaggaacagaaacaa--tgtagcagtcatgaacctgtgagccc 482
                ||||||||||||||||||||||||||   ||  ||||||||||||||||||||||
Sbjct: 616 -----cataaatacttagaggaacagaaacagcttg--gcagtcatgaacctgtgagccc 668

                                                                       
Query: 483 agtacttagaaggtggagatagaaagggcaagcactggaaaccagcctgtgctataagct 542
           |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 669 agtacttagaaggtggagataggaagggcaagcactggagaccagcctgtgctataagct 728

                                                                       
Query: 543 atgtagtgagttgaaatcctgtctttagttatttagtagactattgactcaaaatatcag 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 atgtagtgagttgaaatcctgtctttagttatttagtagactattgactcaaaatatcag 788

                                                            
Query: 603 aataaaatgatctggattatgttgtatataaaataatgtgttttgatgt 651
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 aataaaatgatctggattatgttgtatataaaataatgtgttttgatgt 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space:   667281
Effective search space used:   667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)