TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTCATGGTCTCTTTCCAGAATTGGCTGAGAACACACTTTTTGGCAT
ATGTAATTTTGGTACCTAAATATTAATACCTAGATAGAGACTAGTAAAAA
CAACAATAATTCTGAGATTGAGATCTGGAAACGGCAGACTTGGCTTTAGC
CATAATGAAATCCCTGAAGGATAACAGCATTGAAGAGAATTTCCACATAA
TGCCGATACTAAACTCCAATATCAGATTGAGTGTAGGAGCTCATTAGGGC
TCAAGTGGATTAACGACTTGCCAAGGTTGAAGGACAAGTTTGAAGGATAA
GATAGCGTTGCACTGCTTGGAATTAGCTCTGGATGTGATGTGAAATGAGA
AACTTGTTTTGTAAATCAATGAGTGCCTGCTCTTTCTTAAACTACTGGTT
ACTAGAAAAGGAGCAAGATCTTAGCTCTTGGAAACTAACCCACACTACAG
ACCTCTTTTACAGAGATACCTAGATTTTACTCCTAATCATGTTTCTATTT
CCAGGCTCTGGGGAAAGACACACAGTTACATATGGTGAGCATTAGTCTGA
AGTGGCCTGTTTGCTTTTGCTAAGTCCTCTCATTAAATTTCTTGGATGGC
TTCCTACTCTGCTTATCCTGCTAAATCTAAAGTTTGCTCAGGTGTTTAAT
GTAAAGGATTTTAAAGCAGGCAAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCACCTGAGGAATACAGAATGGCAGAGAAGCAC
CTGAAAAAATGTTCAAAACCCTTAATCATCAGGGAAATGCAAATCAAAAC
AACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATT
CAGGTGACAGCAGATGCTGGCTTGGATGTGGAGAAAGAGGAACACTCCTT
CATTGTTGGTGGGATTGCAGCCTTGTACAACCACTCTGGAAATCAGTCTG
GCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATAC
CTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACA
TGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAC
AGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACA
TCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAA
TTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAAC
ACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATT
AGCCCCAAACCTAGGATACCCAAGATATAAGATACAATTTCCTAAACACA
TGACACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTT
AGAAGTGGAACAAAACACC

Query= MSMg01no270_a24.b1 MSMg01no270_a24.b1 CHROMAT_FILE:
MSMg01no270_a24.b1 PHD_FILE: MSMg01no270_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:38 2005
         (660 letters)



>mm_chr3_18393526_18394580
          Length = 1055

 Score = 1208 bits (625), Expect = 0.0
 Identities = 647/657 (98%), Gaps = 5/657 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctttcatggtctctttccagaattggctgagaacacactttttggcatatgtaa 63
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 855 ggaattctttcatggtctctttccagaattagctgagaacacactttttggcatatgtaa 796

                                                                       
Query: 64  ttttggtacctaaatattaatacctagatagagactagtaaaaacaacaataattctgag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ttttggtacctaaatattaatacctagatagagactagtaaaaacaacaataattctgag 736

                                                                       
Query: 124 attgagatctggaaacggcagacttggctttagccataatgaaatccctgaaggataaca 183
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 attgagatctggaaatggcagacttggctttagccataatgaaatccctgaaggataaca 676

                                                                       
Query: 184 gcattgaagagaatttccacataatgccgatactaaactccaatatcagattgagtgtag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gcattgaagagaatttccacataatgccgatactaaactccaatatcagattgagtgtag 616

                                                                       
Query: 244 gagctcattagggctcaagtggattaacgacttgccaaggttgaaggacaagtttgaagg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gagctcattagggctcaagtggattaacgacttgccaaggttgaaggacaagtttgaagg 556

                                                                       
Query: 304 ataagatagcgttgcactgcttggaattagctctggatgtgatgtgaaatgagaaacttg 363
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 555 ataagatagcgttgcactgcttggaattagctctggatgtgatgtgaaatgagaaac--- 499

                                                                       
Query: 364 ttttgtaaatcaatgagtgcctgctctttcttaaactactggttactagaaaaggagcaa 423
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 --ttgtaaatcaatgagtgcctgctctttcttaaactactggttactagaaaaggagcaa 441

                                                                       
Query: 424 gatcttagctcttggaaactaacccacactacagacctcttttacagagatacctagatt 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 440 gatcttagctcttggaaactaacccacactacagacctcttttacagagataactagatt 381

                                                                       
Query: 484 ttactcctaatcatgtttctatttccaggctctggggaaagacacacagttacatatggt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttactcctaatcatgtttctatttccaggctctggggaaagacacacagttacatatggt 321

                                                                       
Query: 544 gagcattagtctgaagtggcctgtttgcttttgctaagtcctctcattaaatttcttgga 603
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gagcattagtttgaagtggcctgtttgcttttgctaagtcctctcattaaatttcttgga 261

                                                                    
Query: 604 tggcttcctactctgcttatcctgctaaatctaaagtttgctcaggtgtttaatgta 660
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tggcttcctactcttcttatcctgctaaatctaaagtttgctcaggtgtttaatgta 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1055
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1045
Effective search space:   679250
Effective search space used:   679250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)