Query= MSMg01no270_e07.b1 MSMg01no270_e07.b1 CHROMAT_FILE:
MSMg01no270_e07.b1 PHD_FILE: MSMg01no270_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:53 2005
(323 letters)
>mm_chr3_32476072_32476795
Length = 724
Score = 605 bits (313), Expect = e-178
Identities = 316/317 (99%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 5 gaattcctttagaaacagtggaaccggctgtgcggcccctgagggtgggtcctgcagctc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctttagaaacagtggaaccggctgtgcggcccctgagggtgggtcctgcagctc 264
Query: 65 ctcaccaggctggctgtctgcggctctcagaagctgcttcctggcatccaggagttagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcaccaggctggctgtctgcggctctcagaagctgcttcctggcatccaggagttagag 324
Query: 125 accttttcatcctttctcagtgctagttcttgatgcttctttaatgggaatagtgaactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 accttttcatcctttctcagtgctagttcttgatgcttctttaatgggaatagtgaactt 384
Query: 185 gtttataagccgatttgctcaaaccaggggtgtgggctgctcctgggggg-tcctgcaat 243
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 385 gtttataagccgatttgctcaaaccaggggtgtgggctgctcctgggggggtcctgcaat 444
Query: 244 cactctgtcctcacagcaaggatgtaaccactactaaacagtttttactttcttttattc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cactctgtcctcacagcaaggatgtaaccactactaaacagtttttactttcttttattc 504
Query: 304 ccattaaagctgatgtg 320
|||||||||||||||||
Sbjct: 505 ccattaaagctgatgtg 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 724
Length adjustment: 9
Effective length of query: 314
Effective length of database: 715
Effective search space: 224510
Effective search space used: 224510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_e07.g1 MSMg01no270_e07.g1 CHROMAT_FILE:
MSMg01no270_e07.g1 PHD_FILE: MSMg01no270_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:53 2005
(291 letters)
>mm_chr3_32637601_32638291
Length = 691
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%)
Strand = Plus / Minus
Query: 1 cacctctcagacgctcagccacaacctaccagcttcttggaagactgtggcaggagcatt 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 cacctctcagacgctcagcaacaacctaccagcttcttggaagactgtggcaggagcatt 432
Query: 61 gaaggttaaaaccagcccgcaatgcagagtctattcaagatcagcttgggcaactcaatg 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gaaggttagaaccagcccgcaatgcagagtctattcaagatcagcttgggcaactcaatg 372
Query: 121 acactctgactcaaaattttaaagagtaaagacaaaaagaagggctagggatgtagccca 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 371 acactctgactcaaaattttaaagagtaaagacaaaaagaagggttagggatgtagccca 312
Query: 181 gaggaaagacctcacctggctagaataagcaagcacttgtatttcatcagcagtaccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gaggaaagacctcacctggctagaataagcaagcacttgtatttcatcagcagtaccaaa 252
Query: 241 gaaataagcaaataaaataaagggtaaatttaatgctgtgtgtattttcta 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gaaataagcaaataaaataaagggtaaatttaatgctgtgtgtattttcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
