Query= MSMg01no270_p03.b1 MSMg01no270_p03.b1 CHROMAT_FILE:
MSMg01no270_p03.b1 PHD_FILE: MSMg01no270_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:43 2005
(159 letters)
>mm_chr3_54708358_54708916
Length = 559
Score = 300 bits (155), Expect = 3e-86
Identities = 158/159 (99%)
Strand = Plus / Minus
Query: 1 tcatgcagaattttacacacatactgctctgataagtaagaacacttctcaaatgggaaa 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 359 tcatgcagaattttacacacatactgttctgataagtaagaacacttctcaaatgggaaa 300
Query: 61 acatgtggatcgctgaatcagctttgagtaagcacagctcattatatcaaagtaaacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 acatgtggatcgctgaatcagctttgagtaagcacagctcattatatcaaagtaaacttt 240
Query: 121 actttgatgactgcaagcctaggtctgtgtttgccactg 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 actttgatgactgcaagcctaggtctgtgtttgccactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 559
Length adjustment: 8
Effective length of query: 151
Effective length of database: 551
Effective search space: 83201
Effective search space used: 83201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no270_p03.g1 MSMg01no270_p03.g1 CHROMAT_FILE:
MSMg01no270_p03.g1 PHD_FILE: MSMg01no270_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:43 2005
(108 letters)
>mm_chr3_54518224_54518730
Length = 507
Score = 194 bits (100), Expect = 2e-54
Identities = 106/108 (98%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 1 accttgaggctctaggtttaggtcttggaacttgtggttggcagttaggggcacttgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accttgaggctctaggtttaggtcttggaacttgtggttggcagttaggggcacttgcca 260
Query: 61 cgctgtgattttttttctgttaaatctggtgggacttcttttcctata 108
|| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 cgatgtgattttttt-ctgttaaatctggtgggacttcttttcctata 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 108
Length of database: 507
Length adjustment: 8
Effective length of query: 100
Effective length of database: 499
Effective search space: 49900
Effective search space used: 49900
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
