Query= MSMg01no273_m17.b1 MSMg01no273_m17.b1 CHROMAT_FILE:
MSMg01no273_m17.b1 PHD_FILE: MSMg01no273_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:14 2005
(318 letters)
>mm_chr3_128624209_128624926
Length = 718
Score = 584 bits (302), Expect = e-171
Identities = 311/314 (99%)
Strand = Plus / Plus
Query: 5 gaattcctactacaaaccaccaagtctgtggtaatttgttgccacaaattgggttcccta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctactacaaaccaccaagtctgtggtaatttgttgccacaaattgggttcccta 264
Query: 65 ggaactcaattcaaaccccattccttcaacttggcagatagaacaaaaccacaaataatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggaactcaattcaaaccccattccttcaacttggcagatagaacaaaaccacaaataatg 324
Query: 125 cccagtaggaggttctccagtgtaaaagaatgccacagacagggtcccagcaatgcttcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cccagtaggaggttctccagtgtaaaagaatgccacagacagggtcccagcaatgcttcc 384
Query: 185 aatgcccacaatgtagtgacacaaggcttctagacattagctctcagacctttaatattg 244
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 385 aatgcccacaatgtagttacacaaggcttctagacattagctctgagacctttaatattg 444
Query: 245 tgtatctgaattttgctccctagatctctgctgtttcttttaaagttctttgaccttaaa 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 tgtatctgaattttgctccctagatctctgttgtttcttttaaagttctttgaccttaaa 504
Query: 305 ggttaaattggttc 318
||||||||||||||
Sbjct: 505 ggttaaattggttc 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_m17.g1 MSMg01no273_m17.g1 CHROMAT_FILE:
MSMg01no273_m17.g1 PHD_FILE: MSMg01no273_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:14 2005
(286 letters)
>mm_chr3_128805289_128805974
Length = 686
Score = 205 bits (106), Expect = 2e-57
Identities = 144/178 (80%), Gaps = 33/178 (18%)
Strand = Plus / Minus
Query: 1 aaggctgcagcttttcctatatgttattaattttaattgtaacttgatactgagttttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 308 aaggctgcagcttttcctatatgttattaattttaattgtaacttgatactgatttttgt 249
Query: 61 ttttctgtagctctaagcatcttttctcagaatgtgttgtactgctgctaacagaacaga 120
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttttctgtagctctaagcatcttttctcagaatgtgttgtactgct-------------- 203
Query: 121 atataaatcattctctctagccatgattcacaaaattattgaagagagtatgtatata 178
|||||||||||||||||||||||||||||||||||||||
Sbjct: 202 -------------------gccatgattcacaaaattattgaagagagtatgtatata 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
