Query= MSMg01no274_f22.b1 MSMg01no274_f22.b1 CHROMAT_FILE:
MSMg01no274_f22.b1 PHD_FILE: MSMg01no274_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:53 2005
(321 letters)
>mm_chr3_153144291_153145010
Length = 720
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%), Gaps = 1/318 (0%)
Strand = Plus / Plus
Query: 4 ggaattctacccttccccaaggcgcatttaggttagatcccttgttagtctccagtgcaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctacccttccccaaggcgcatttaggttagatcccttgttagtctccagtgcaa 263
Query: 64 ggccccctcagtggtatccgacttatgtaatgaaatcgaagtaactgcccaagactggat 123
||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 264 ggccccc-cagtggtatctgacttatgtaatgaaatctaagtaactgcccaagactggat 322
Query: 124 tctcttctttaaaaagacattcaaggtctggaggttttattgggagagaacagagtgctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 323 tctcttctttaaaaagacattcaaggtctggaggttttattgggagagaacagagcgctt 382
Query: 184 ctcctccacttgctcttcactcttgcacgctctgccacatgcacatttgtttcttttgta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctcctccacttgctcttcactcttgcacgctctgccacatgcacatttgtttcttttgta 442
Query: 244 aaaatttataaagagaagctcaaaacatctttggctttgactatgacatttctgttttaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaaatttataaagagaagctcaaaacatctttggctttgactatgacatttctgttttaa 502
Query: 304 agcagctactttgatgga 321
||||||||||||||||||
Sbjct: 503 agcagctactttgatgga 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 720
Length adjustment: 9
Effective length of query: 312
Effective length of database: 711
Effective search space: 221832
Effective search space used: 221832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_f22.g1 MSMg01no274_f22.g1 CHROMAT_FILE:
MSMg01no274_f22.g1 PHD_FILE: MSMg01no274_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:54 2005
(287 letters)
>mm_chr3_153330957_153331643
Length = 687
Score = 451 bits (233), Expect = e-131
Identities = 267/287 (93%), Gaps = 14/287 (4%)
Strand = Plus / Minus
Query: 1 agcagtccttagtctgtatctgtactgaccggtatttgcgtgaaagccgccttgcgtgtg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 651 agcagtccttagtctgtatctgtactgaccggtatttgcgtgaaagccgcattgcgtgtg 592
Query: 61 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaatggccgtgtgagagaatg 120
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 591 cgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatggccgtgtgagagaatg 532
Query: 121 ggcacttgcatgtaagctctgtcatgcctacggagactaaagaacagccccaggcagcag 180
|||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 531 ggcacttgcacgtaagctctgtcatgcctacggagactaaagaa--------------ag 486
Query: 181 cttccattgttttcctctgaagggaactggcctgtgtgggaccatgggcccaagatgacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cttccattgttttcctctgaagggaactggcctgtgtgggaccatgggcccaagatgacg 426
Query: 241 attctctgatgtgaaagtcttttcaagggttttaagtttttggtcaa 287
||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 425 attctctgaggtgaaagtcttttcaagggttttaactttttggtcaa 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
