XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAATCCGCGGAATTCTT
TCCATTTTACATTTACTCTGTTATTTGGAAAGAATGGATATAAAAGTGTG
CCCAGAAGCTGTTGTGCTGTGTTGGGCTTCACTGAGCCTGCAGTCATGCT
ATGGAGTTACCCCTCACACTTTGAAGTGAATTCTTCATAGAACCATAACT
TGAAAAGCCACCTCCACCCCTGATACACAGCACAAAGCAGCATCAGAATC
GCCAGCCTATCCACCTTGCAATCTGGCCTTGGTCTCCAGTTCCATTCTTA
ACTCCTCTAATCAGCTATCTTGGCAGCAACGGACAGGGCCAACGTCGGTG
ACATGCTGTAGAGGCAAAAGCAATAATACCCAGAGCACAGAAAAAAAATT
CACAGATTATCGATTATTAGTAAAGTATTGTGAGAATAGCAGATGACAGG
CAGGATGAGCTCAAATAAGTCTGTTATTGGAAGGCTTCTGCTATATATGT
GAGCATATAGATGTCTGTGCATATATATACATGAGGAATTTGTCAGGGAA
AGGAAGTAGACTCTGCAATGATAAATTCTATACTTTGGGGGAATCCGACA
CTGTCACTCTTTGCTGATACTTACTGGATATTTTTAACTGGTTGGACTTT
TTTTAACGCACTGATTAGGTACGGCAATGAATACTCAATTGGTGTATGAT
GTCCCGTGACTGCTTTTCGTCTATTTCAAC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAACAGTGAACTTTGGGATATCACTCGCTGTTTA
TTTGAGCTCATTTGTTTCCCTTGCTTTGTTTCTGTTCTTTGTATGCTTTA
GTTTTAATTTTGGTAGATGAGACATGCTTAGAAATTCACCCACTTCTTGA
TTTTTATTTTGAGTTTAGGTTTCCAGGACATGCTCTGATCTCTTTTCTTG
ATTTTCTTTTGTGTCTCTTGCAAAATCTCCCTTTTCATTTCTAATTTTAT
TAAGTTGAATCTTCTGTTAGTTTTAGTTAATTGGACTGTCAATTTTATTT
ATCATTTTTTTTTTTCTCCCCCCACCACCGATTCTTTGTGTTCTTCTTGC
TTCCACCTGATTAATTTCTAACATGAACGGATTTTCTTTCTTTTCATTAA
CTTATTTCATATTTGGCTCTTCATTGTTTGTCTAACACCTTCACGTACAT
CAGCTATTTACTTGATATTTCTCTGACTTCTAATACCCTTTTATTACCCA
TATCTATTCCTATACCATTTCTCTTACAGACATATGTTCGTGACCACCCT
TTACCCCTCACCCGTTTTATTCCTCCCGTTTCGCTTCTGGTCATTACTTC
GTTTTACCTTTCTATCCCTATTCTTTTATGCACCGTATCGGCCTTATAAC
ATTTTTTAGGCCCCACCCACTGTTGGTCCAGTGTATCTTTTCCCCACACT
CCC

Query= MSMg01no274_n01.b1 MSMg01no274_n01.b1 CHROMAT_FILE:
MSMg01no274_n01.b1 PHD_FILE: MSMg01no274_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:26 2005
         (519 letters)



>mm_chr3_119529173_119530092
          Length = 920

 Score =  886 bits (458), Expect = 0.0
 Identities = 501/516 (97%), Gaps = 3/516 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattctttccattttaca--tttactctgttatttggaaagaatggatataaaagtgtg 63
           |||||||||||| |||| |  ||||||| ||| |||||||||||||||||||||||||||
Sbjct: 206 gaattctttcca-tttaaatctttactccgttgtttggaaagaatggatataaaagtgtg 264

                                                                       
Query: 64  cccagaagctgttgtgctgtgttgggcttcactgagcctgcagtcatgctatggagttac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cccagaagctgttgtgctgtgttgggcttcactgagcctgcagtcatgctatggagttac 324

                                                                       
Query: 124 ccctcacactttgaagtgaattcttcatagaaccataacttgaaaagccacctccacccc 183
           |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 325 ccctcatactttgaagtgaattcttcatagaaccatagcttgaaaagccacctccacccc 384

                                                                       
Query: 184 tgatacacagcacaaagcagcatcagaatcgccagcctatccaccttgcaatctggcctt 243
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgatacacagcacaaaacagcatcagaatcgccagcctatccaccttgcaatctggcctt 444

                                                                       
Query: 244 ggtctccagttccattcttaactcctctaatcagctatcttggcagcaacggacagggcc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 ggtctccagttccattcttaactcctctaatcagctatcttggcagcaatggacagggcc 504

                                                                       
Query: 304 aacgtcggtgacatgctgtagaggcaaaagcaataatacccagagcacagaaaaaaaatt 363
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacgtcagtgacatgctgtagaggcaaaagcaataatacccagagcacagaaaaaaaatt 564

                                                                       
Query: 364 cacagattatcgattattagtaaagtattgtgagaatagcagatgacaggcaggatgagc 423
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 565 cacagattatcgattattagtaaagtattgtgagaatagcagatgaaaggcaggatgagc 624

                                                                       
Query: 424 tcaaataagtctgttattggaaggcttctgctatatatgtgagcatatagatgtctgtgc 483
           |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 625 tcaaataagtctgttaatggaaggtttctgctatatatgtgagcatatagatgtctgtgc 684

                                               
Query: 484 atatatatacatgaggaatttgtcagggaaaggaag 519
           |||||||||||||||| |||||||||||||||||||
Sbjct: 685 atatatatacatgagggatttgtcagggaaaggaag 720


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 920
Length adjustment: 10
Effective length of query: 509
Effective length of database: 910
Effective search space:   463190
Effective search space used:   463190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)