Query= MSMg01no277_d13.b1 MSMg01no277_d13.b1 CHROMAT_FILE:
MSMg01no277_d13.b1 PHD_FILE: MSMg01no277_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:19 2005
(210 letters)
>mm_chr3_94910621_94911229
Length = 609
Score = 366 bits (189), Expect = e-106
Identities = 204/209 (97%), Gaps = 1/209 (0%)
Strand = Plus / Minus
Query: 1 agctcagtccatctcggtccagctgattcttaacaagagttcttagcaacccgatcaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agctcagtccatctcggtccagctgattcttaacaagagttcttagcaacccgatcaaag 349
Query: 61 atacgaacctatattggcctactgagccaccgtagactcacggtcttcggtcggtggatt 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 348 atacgaacctatattggcctactgagccaccgtagactcacggtctacggtcggtggatt 289
Query: 121 ccttggggtgtgacgtgcatctgtcacgtgatccgaagtcccctctgattggcttctctt 180
|||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ccttggggtgtggcat-catctgtcacgtgatccgaagtcccctctgattggcttctctt 230
Query: 181 ttctccggctagatcgacgaacgccgaga 209
|||||||||||||| ||||||||||||||
Sbjct: 229 ttctccggctagatagacgaacgccgaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 609
Length adjustment: 9
Effective length of query: 201
Effective length of database: 600
Effective search space: 120600
Effective search space used: 120600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_d13.g1 MSMg01no277_d13.g1 CHROMAT_FILE:
MSMg01no277_d13.g1 PHD_FILE: MSMg01no277_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:19 2005
(327 letters)
>mm_chr3_94759416_94760142
Length = 727
Score = 625 bits (323), Expect = 0.0
Identities = 326/327 (99%)
Strand = Plus / Plus
Query: 1 attcactggacccgtggcttcatttctccacctctgttcccttctgcctcagcaagaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcactggacccgtggcttcatttctccacctctgttcccttctgcctcagcaagaagt 260
Query: 61 acagaaattctcggacaacgacaagctgtacctctaccttcagctcccatcgggacccag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 acagaaattctcggacaacgacaagctgtacctctaccttcagctcccatcggggcccag 320
Query: 121 cgttggcgagaagaggtactttggtggtagtgtttatatgtcacaggttctgattttgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgttggcgagaagaggtactttggtggtagtgtttatatgtcacaggttctgattttgag 380
Query: 181 tctcactgtattgagtcaaaaagtaggagatgaggacgaggaggctggagggatggctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctcactgtattgagtcaaaaagtaggagatgaggacgaggaggctggagggatggctca 440
Query: 241 ggggttaagcacactggctgcccttggcagaggacccgggttgtgttcccagtacccaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggggttaagcacactggctgcccttggcagaggacccgggttgtgttcccagtacccaca 500
Query: 301 tggtggctcacaaccatccataactct 327
|||||||||||||||||||||||||||
Sbjct: 501 tggtggctcacaaccatccataactct 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
