Query= MSMg01no288_l21.b1 MSMg01no288_l21.b1 CHROMAT_FILE:
MSMg01no288_l21.b1 PHD_FILE: MSMg01no288_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:53 2005
(360 letters)
>mm_chr3_121406379_121407141
Length = 763
Score = 687 bits (355), Expect = 0.0
Identities = 360/363 (99%), Gaps = 3/363 (0%)
Strand = Plus / Minus
Query: 1 actcacataaacatatgtctgagtaaaagcagccaggcagagaaggatagatagacgccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 actcacataaacatatgtctgagtaaaagcagccaggcagagaaggatagatagacgccg 504
Query: 61 tatgatctctaagtcaagagaaagaaaaaagaatgtggatggagattcccacctgcggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tatgatctctaagtcaagagaaagaaaaaagaatgtggatggagattcccacctgcggtt 444
Query: 121 cttctggggtgctggatacacaactgtgttttttgttaa---aacaacaacaacaacact 177
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 443 cttctggggtgctggatacacaactgtgttttttgttaaaacaacaacaacaacaacact 384
Query: 178 taaccaatttatttgcacatcatatgtacagtttctatatattccattcatccaaacctt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 taaccaatttatttgcacatcatatgtacagtttctatatattccattcatccaaacctt 324
Query: 238 taaaaaggtttgtggaaagccagtgagtgactcagcacactggcccaagtcccttcagac 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 taaaaaggtttgtggaaagccagtgagtgactcagcacactggcccaagtcccttcagac 264
Query: 298 tattgcttgataccgcttccttatcgctcagcctttctgcatgtggtgattgatgtcagg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tattgcttgataccgcttccttatcgctcagcctttctgcatgtggtgattgatgtcagg 204
Query: 358 aga 360
|||
Sbjct: 203 aga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 763
Length adjustment: 9
Effective length of query: 351
Effective length of database: 754
Effective search space: 264654
Effective search space used: 264654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_l21.g1 MSMg01no288_l21.g1 CHROMAT_FILE:
MSMg01no288_l21.g1 PHD_FILE: MSMg01no288_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:53 2005
(261 letters)
>mm_chr3_121236729_121237389
Length = 661
Score = 489 bits (253), Expect = e-143
Identities = 259/261 (99%)
Strand = Plus / Plus
Query: 1 ggcctctggatatatgaatgacctggtgaagaaacctcctactttcatccaccacgtatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcctctggatatatgaatgacctggtgaagaaacctcctactttcatccaccacgtatc 260
Query: 61 tgcaccagtctcttagatgtctcttactcaagtcttttatggtgcacaccggtcttcaga 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcaccagtctcttatatgtctcttactcaagtcttttatggtgcacaccggtcttcaga 320
Query: 121 aatcattttctcctttcaaagtgtgaagacaattctttgtgtttccctgaaacctggtcc 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaccattttctcctttcaaagtgtgaagacaattctttgtgtttccctgaaacctggtcc 380
Query: 181 tgatgggtgctatctggagatgctcattggagaaaataccatgtggtagatgtgtttcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatgggtgctatctggagatgctcattggagaaaataccatgtggtagatgtgtttcct 440
Query: 241 tatatatgacacaagtcgtaa 261
|||||||||||||||||||||
Sbjct: 441 tatatatgacacaagtcgtaa 461
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 261
Length of database: 661
Length adjustment: 9
Effective length of query: 252
Effective length of database: 652
Effective search space: 164304
Effective search space used: 164304
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
