CGTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCAACCATACAGCTATAGTTGCAAAGACGATCAACTTTCAATTGT
TTTCAGAAGTTATATAAAAAGATAAATTTAGAAATCCCAAATGAAAGTAG
ATTTAATATTACAATCTTAAATATTTCATATGTAATCATATTTCCTAAGG
CAGTTAAAATTGAGATAAAAATAACTATGAGAAAGAAATAATTCCCTAAG
CTTGGCTGTAAACAACAGATTGCATCCTCTTTGTTTCCCTATATGTCATT
CCAGAGAGCCTAAGAGGGTGAATGGCCTCTTGTTTTTGTTCATGTATATG
AAATCATGCCACGCTGCGAAAGCAAAGAGCATATGTACTTTCCCAAGGAG
TCAACTGAAGGAAAAGGAGTTTAAATAATGGCAGAAACAAAGGCAGTCAG
ATATAAGACAAAATTTCTTGAGAAGAAACCAATCATGATTTAAAAAAAAA
TGTAATGGAAATTATTAGGGAAAATACCACTTCTTATCTTAATATTCTGG
AGGTCTGTCCTGCCATTTTGTGACTCCATTTCATTTCTCTCATATTTCCA
ATCACACTTAAAATCTTTAAAATTTGCATCTATAGGGAATTAATGGTATC
TTCAGAAAAAGAAAAGAAAAAGAAAACTGATGCATTTCCACAATGCACTA
GCGTTCTAAGGAAACCAGCTGAACACTN

TTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAATCACCACAGATTAAAAAAAA
ATAGAAGAAGACATTCCATGACAAACCCATGCTTTAAAAATATCTTTCTA
CTATTCCAGCCCTACAGAGGATATTAGAAGGAGAACTCCAGCACAAGTAG
GTAACTATATCCAAGAAAATGCAAGAAATAATCATGTCACAACTGACTCA
AAAGAAGAGAATCACACACACATAATACCATCCCCAACAATAAAAAATAA
CAAGAACTAGAAATCATTGCTCTTTAATATCTCTCAATACCAATGGACTT
AATTCCCTAATAAAAAGACACAGGGTAATAGCCTGGATACACAAACAGGA
TTCATCATTTTGCAGCATACAATAAACACTCCTCAGCAACAAAGACAGAA
ACTACCTCAGAGTAAAGGGCTGGAAAAAAGTCTTCCAAGCAAATGGTCCC
AAGAAACAAGCTGGAGCAGCTATTCTAATATCCAATGAAACAGACTTCCA
ACCAAAAGTAATCAAAAGAGATGGGGAAGACACTTCATTCTCATCTAAGA
AAAAAATTCTCAAAGATAAAGTCTTGATAGATTTCTGAGCATCTATGTCC
CCAAATGGCAGGGAAACCCACGTTTTGTCAAAGAAACTTTACTAAATCTG
GAAAACATCCCG

Query= MSMg01no291_a04.b1 MSMg01no291_a04.b1 CHROMAT_FILE:
MSMg01no291_a04.b1 PHD_FILE: MSMg01no291_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:25:42 2005
         (679 letters)



>mm_chr3_80586039_80587117
          Length = 1079

 Score = 1274 bits (659), Expect = 0.0
 Identities = 671/675 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaccatacagctatagttgcaaagacgatcaactttcaattgttttcagaagtt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaccatacagctatagttgcaaagacgatcaactttcaattgttttcagaagtt 264

                                                                       
Query: 65  atataaaaagataaatttagaaatcccaaatgaaagtagatttaatattacaatcttaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atataaaaagataaatttagaaatcccaaatgaaagtagatttaatattacaatcttaaa 324

                                                                       
Query: 125 tatttcatatgtaatcatatttcctaaggcagttaaaattgagataaaaataactatgag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatttcatatgtaatcatatttcctaaggcagttaaaattgagataaaaataactatgag 384

                                                                       
Query: 185 aaagaaataattccctaagcttggctgtaaacaacagattgcatcctctttgtttcccta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaagaaataattccctaagcttggctgtaaacaacagattgcatcctctttgtttcccta 444

                                                                       
Query: 245 tatgtcattccagagagcctaagagggtgaatggcctcttgtttttgttcatgtatatga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatgtcattccagagagcctaagagggtgaatggcctcttgtttttgttcatgtatatga 504

                                                                       
Query: 305 aatcatgccacgctgcgaaagcaaagagcatatgtactttcccaaggagtcaactgaagg 364
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 505 aatcatgccacgctgcgaaagcaaagagcatatgtacattcccaaggagtcaactgaagg 564

                                                                       
Query: 365 aaaaggagtttaaataatggcagaaacaaaggcagtcagatataagacaaaatttcttga 424
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 565 aaaaggagtttaaataatggcagaaacaaaggcagtaagatataagacaaaatttcttga 624

                                                                       
Query: 425 gaagaaaccaatcatgatttaaaaaaaaatgtaatggaaattattagggaaaataccact 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaagaaaccaatcatgatttaaaaaaaaatgtaatggaaattattagggaaaataccact 684

                                                                       
Query: 485 tcttatcttaatattctggaggtctgtcctgccattttgtgactccatttcatttctctc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcttatcttaatattctggaggtctgtcctgccattttgtgactccatttcatttctctc 744

                                                                       
Query: 545 atatttccaatcacacttaaaatctttaaaatttgcatctatagggaattaatggtatct 604
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 745 atatttccaatcacacttaaaatctttaaaatttgcatctatagggaattaatgatatct 804

                                                                       
Query: 605 tcagaaaaagaaaagaaaaagaaaactgatgcatttccacaatgcactagcgttctaagg 664
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 805 tcagaaaaagaaaagaaaaagaaaactgatgcatttccacaatgcattagcgttctaagg 864

                          
Query: 665 aaaccagctgaacac 679
           |||||||||||||||
Sbjct: 865 aaaccagctgaacac 879


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space:   715161
Effective search space used:   715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)