Query= MSMg01no292_p12.b1 MSMg01no292_p12.b1 CHROMAT_FILE:
MSMg01no292_p12.b1 PHD_FILE: MSMg01no292_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:12 2005
(248 letters)
>mm_chr3_131930487_131931138
Length = 652
Score = 368 bits (190), Expect = e-106
Identities = 232/248 (93%), Gaps = 5/248 (2%)
Strand = Plus / Minus
Query: 4 ggaattcctgtgtaatcaaaggatgactggagggagtcagttctctccttgtagcatgga 63
|||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 577 ggaattcctgtggagtcaaaggataactggagggagtcagttctctccttgtagcatgga 518
Query: 64 tttttgaagattacctctagggtgaggtttgtgacataaagtgtttttacactctgagcc 123
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tttttgaagatta-atctagggtgaggtttgtgacataaagtgtttttacactctgagcc 459
Query: 124 atcttgtaaattcatacttactgatttttaaagacta----ttttttcttgcttttcaaa 179
|||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 458 atcttggaaattcatacttactgatttttaaagactatttttttttttttgcttttcaaa 399
Query: 180 aaatttaaccaattttataatcttatgaagatcctcttcctgaaactttatggcagctct 239
||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||| | |
Sbjct: 398 aaacttacccaattttataatcttatgaagattctcttcctgaaactttatggcagtttt 339
Query: 240 gtctttta 247
||||||||
Sbjct: 338 gtctttta 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 652
Length adjustment: 9
Effective length of query: 239
Effective length of database: 643
Effective search space: 153677
Effective search space used: 153677
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no292_p12.g1 MSMg01no292_p12.g1 CHROMAT_FILE:
MSMg01no292_p12.g1 PHD_FILE: MSMg01no292_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:12 2005
(327 letters)
>mm_chr3_131772118_131772842
Length = 725
Score = 605 bits (313), Expect = e-177
Identities = 323/327 (98%), Gaps = 2/327 (0%)
Strand = Plus / Plus
Query: 1 caggctcctacacagctttgttcaataattaacacctatgcttaaaataagagcacatct 60
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 201 caggctcctacacagctttgttcaataattaatacatatgcttaaaataagagcacatct 260
Query: 61 tttcctctctctctcctaccagctgcacatttctagtatttttaatggatttttaagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcctctctctctcctaccagctgcacatttctagtatttttaatggatttttaagtga 320
Query: 121 ttttttttcaataatattttgaaaatacacaaacagtccagattctcccatccctctttc 180
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttt--caataatattttgaaaatacacaaacagtccagattctcccatccctctttc 378
Query: 181 caagcccacactacagtgccaattctcagtgttcctgatggccaccagtggcaataggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 caagcccacactacagtgccaattctcagtgttcctgatggccaccagtggcaataggct 438
Query: 241 ctgacccctgcctcagttgcaccgttagtcctgaatcccactgtttatttagttttgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctgacccctgcctcagttgcaccgttagtcctgaatcccactgtttatttagttttgaac 498
Query: 301 atttcagagcccaaaacatggaataag 327
|||||||||||||||||||||||||||
Sbjct: 499 atttcagagcccaaaacatggaataag 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 725
Length adjustment: 9
Effective length of query: 318
Effective length of database: 716
Effective search space: 227688
Effective search space used: 227688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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