Query= MSMg01no292_p19.b1 MSMg01no292_p19.b1 CHROMAT_FILE:
MSMg01no292_p19.b1 PHD_FILE: MSMg01no292_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:13 2005
(617 letters)
>mm_chr3_107525013_107526027
Length = 1015
Score = 1127 bits (583), Expect = 0.0
Identities = 593/597 (99%), Gaps = 2/597 (0%)
Strand = Plus / Plus
Query: 21 aatataaacacaaagtctgatgtttctcctctctgatagagaccagacagagaaaataaa 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aatataaacacaaagtctgatgtttctcctctctgatagagaccagacagagaaaataaa 280
Query: 81 gggccaagaatgactcaggaagggattataggggggactggagaactgggtcctcaaatc 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gggccaagaatgactcaggaagggattataggggggactggagaactgggtcctcaaatc 340
Query: 141 acttacattacctgccaagaagataagcttccctcagagagctcagtcaacttaaagact 200
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 acttatattacctgccaagaagataagcttccctcagagagctcagtcaacttaaagact 400
Query: 201 cactaaagtctttaaaaagaaatgtaattgcctatcacctaacaataaaaataattaaag 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cactaaagtctttaaaaagaaatgtaattgcctatcacctaacaataaaaataattaaag 460
Query: 261 gcagacttagtttgataagagtgccctgagttctctaatgagaatataaaaacacaaaat 320
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 461 gcagacttagtttgataagagtgccctgagttctctaatgagaatataaaa--acaaaat 518
Query: 321 caaattcaagagattttaccatcatgaacatgaatcatgaaaacatacattgggcaaaga 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 caaattcaagagattttaccatcatgaacatgaatcatgaaaacatacattgggcaaaga 578
Query: 381 atgatgatcaattctcaagttttagatgccaactggtataataataatggcatacaaaaa 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 atgatgatcaattctcaagttttagatgccaactggtataataataatggcatacaaaaa 638
Query: 441 tctggtaaacagttgaaaagacaaaaagaaaaatagagctacatttgaattccttggcat 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tctggtaaacagttgaaaagacaaaaagaaaaatagagctacatttgaattccttggcat 698
Query: 501 ttcattaactagcaaatgttcattttcaaaagagaaaaaatggggaaaattaaatcacac 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ttcattaactagcaaatgttcattttcaaaagagaaaaaatggggaaaattaaatcacac 758
Query: 561 atgagaaagacaaatgtcttttgaatgaacaaccattttagtcatttgaaaagtcag 617
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 atgagaaagacaaacgtcttttgaatgaacaaccattttagtcatttgaaaagtcag 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1015
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1005
Effective search space: 610035
Effective search space used: 610035
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_p19.g1 MSMg01no292_p19.g1 CHROMAT_FILE:
MSMg01no292_p19.g1 PHD_FILE: MSMg01no292_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:14 2005
(296 letters)
>mm_chr3_107709926_107710618
Length = 693
Score = 542 bits (280), Expect = e-158
Identities = 291/296 (98%), Gaps = 3/296 (1%)
Strand = Plus / Minus
Query: 1 agcatagttcctatattaaagctagagttacgcttgattgaggtatagtaatattggact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agcatagttcctatattaaagctagagttacgcttgattgaggtatagtaatattggact 434
Query: 61 tggatagcaggtggagaaatgtaaactttctgttctctgggaacagatagaaccctgccc 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 433 tggatagcaggtggagaaatgtagactttctgttctctgggaacagatagaaccctgccc 374
Query: 121 tgactccctctagcctagatgcttcaacccaggatctgctaagtcattgggtgggatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tgactccctctagcctagatgcttcaacccaggatctgctaagtcattgggtgggatctg 314
Query: 181 ggctctttttcaagcatgttctgagaactcctctttttttcttttttcctgcctgctcct 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 313 ggctctttttcaagcatgttctgagaactc---tttttttcttttttcctgcctgctcct 257
Query: 241 tcctctatgtgcaaatacaagcaggcgcttccctgtggaaaaagaatatgcctgtg 296
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 256 tcctctatgtgcaaatacaggcaggcgcttccctgtggaaaaagaatatgcctgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 693
Length adjustment: 9
Effective length of query: 287
Effective length of database: 684
Effective search space: 196308
Effective search space used: 196308
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
