Query= MSMg01no294_e10.b1 MSMg01no294_e10.b1 CHROMAT_FILE:
MSMg01no294_e10.b1 PHD_FILE: MSMg01no294_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:55 2005
(317 letters)
>mm_chr3_100369874_100370595
Length = 722
Score = 567 bits (293), Expect = e-166
Identities = 309/317 (97%), Gaps = 5/317 (1%)
Strand = Plus / Plus
Query: 5 gaattcataagcaaagtgtttcataaaatattatagcgttctcaaatttattgtcatcaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcataagcaaagtgtttcataaaatattatagcgttctcaaatttattgtcatcaa 264
Query: 65 tagatgatgtatgtacgaaataaaagagagaaagtgtcttgaattgtcacagaaattcaa 124
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 tagatgatgtatgtatgaaataaaagagagaaagtgtcttgaattatcacagaaattcaa 324
Query: 125 gggacagaaaatttatagcattactatttatc-----ttataataagaactatagttctt 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 gggacagaaaatttatagcattactatttatcttatattataataagaactatagttctt 384
Query: 180 gataaaaatttacccttttttctgccaaaatatagagcagtatcaacaacaaaaataacc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gataaaaatttacccttttttctgccaaaatatagagcagtatcaacaacaaaaataacc 444
Query: 240 agtgcaggtctgtaagtcccttaggttcacgccaattttagtgagtatgattctttacgt 299
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 445 agtgcaggtctgtaagtcccttaggttcatgccaattttagtgagtatgattctttacgt 504
Query: 300 cacacatttgccactga 316
|||||||||||||||||
Sbjct: 505 cacacatttgccactga 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 722
Length adjustment: 9
Effective length of query: 308
Effective length of database: 713
Effective search space: 219604
Effective search space used: 219604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_e10.g1 MSMg01no294_e10.g1 CHROMAT_FILE:
MSMg01no294_e10.g1 PHD_FILE: MSMg01no294_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:55 2005
(283 letters)
>mm_chr3_100541785_100542466
Length = 682
Score = 470 bits (243), Expect = e-137
Identities = 270/283 (95%), Gaps = 8/283 (2%)
Strand = Plus / Minus
Query: 1 aaggaaacccggtttcctccaccctttaggagttaagagatagcagcggacaccacggga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 613 aaggaaacccggtttcctccaccctttaggagttaagagatagcagcggacaccacagga 554
Query: 61 gaacattccgaaagcactgttttagacaggagttatcatagctctgaatgtgtagattcc 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 553 gaacattccgaaagcactgttttagacaggagttatcataactctgaatgtgtagattcc 494
Query: 121 attgcttctgatcatggttcatatgtctgatgaaatgaagttcttgacttgaacgtggac 180
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 493 attgcttctga-------tcatatgcctgatgaaatgaagttcttgacttgaacgtggac 441
Query: 181 atgggatgagaatatgaaatcaagacttcagggaaagaattgaaggtgtggctatttcac 240
||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 440 atgggctgagaatatgaaatcaagacttcagggaaagagttgaaggtgtggctatttcac 381
Query: 241 tggacaggagtgtgtgggggtgaccttcagggaatgacgtcct 283
||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 380 tggacaggagtgtgt-ggggtgaccttcagggaatgacgtcct 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 682
Length adjustment: 9
Effective length of query: 274
Effective length of database: 673
Effective search space: 184402
Effective search space used: 184402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
