Query= MSMg01no296_l19.b1 MSMg01no296_l19.b1 CHROMAT_FILE:
MSMg01no296_l19.b1 PHD_FILE: MSMg01no296_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:00 2005
(324 letters)
>mm_chr3_79749443_79750164
Length = 722
Score = 592 bits (306), Expect = e-173
Identities = 313/316 (99%), Gaps = 2/316 (0%)
Strand = Plus / Plus
Query: 5 gaattccagcatgcaagagttgagtcagactgactttaagtttggggcagcctggactac 64
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 gaattccagcatgcaagagttgagtcagactgactttaagtttgggtcagcctggactac 264
Query: 65 agtcagaccctgtctcaaaaacaaatgaaaaccaaaacagaactcagaaagcaagaactt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtcagaccctgtctcaaaaacaaatgaaaaccaaaacagaactcagaaagcaagaactt 324
Query: 125 tcactttatgagagattttttttctttttggacttgttagaacacttatctgaaatcaga 184
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcactttatgagagattttttt--tttttggacttgttagaacacttatctgaaatcaga 382
Query: 185 aatagtttactgtgactttggcatgttcttacaatgttgggcctgattttctacagaatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aatagtttactgtgactttggcatgttcttacaatgttgggcctgattttctacagaatg 442
Query: 245 actattgagcaaaattttagggaagagattatgttgtagactcatgtttcatagaaatac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 actattgagcaaaattttagggaagagattatgttgtagactcatgtttcatagaaatac 502
Query: 305 aagtttttcctggttc 320
||||||||||||||||
Sbjct: 503 aagtttttcctggttc 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 722
Length adjustment: 9
Effective length of query: 315
Effective length of database: 713
Effective search space: 224595
Effective search space used: 224595
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_l19.g1 MSMg01no296_l19.g1 CHROMAT_FILE:
MSMg01no296_l19.g1 PHD_FILE: MSMg01no296_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:01 2005
(294 letters)
>mm_chr3_79907107_79907800
Length = 694
Score = 555 bits (287), Expect = e-162
Identities = 290/291 (99%)
Strand = Plus / Minus
Query: 1 tcttgagacactgattggattgcccttgagtctgccacccattccatatagatctccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcttgagacactgattggattgcccttgagtctgccacccattccatatagatctccagt 432
Query: 61 gctttccaaccaggtggaaagcaagttacctgtgttaatagtgtgtaacaatattctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gctttccaaccaggtggaaagcaagttacctgtgttaatagtgtgtaacaatattctgca 372
Query: 121 cagttgaaaaatgctctatatagtgatacggttcataaatatagtgaaatatactgttca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 371 cagttgaaaaatgctctatatagtgatacggttcataaatatagtgaaatatacggttca 312
Query: 181 taaatatagtgaaaatattaacaacatgttaataaacaaatgtgttgtaagtaatacaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 taaatatagtgaaaatattaacaacatgttaataaacaaatgtgttgtaagtaatacaat 252
Query: 241 tcaattcataaagcattactgttacatactatttgtagcctgattccttat 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tcaattcataaagcattactgttacatactatttgtagcctgattccttat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
