Query= MSMg01no298_f19.b1 MSMg01no298_f19.b1 CHROMAT_FILE:
MSMg01no298_f19.b1 PHD_FILE: MSMg01no298_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:02 2005
(372 letters)
>mm_chr3_65812831_65813603
Length = 773
Score = 706 bits (365), Expect = 0.0
Identities = 371/373 (99%), Gaps = 1/373 (0%)
Strand = Plus / Plus
Query: 1 gatggcattacaggcatgctaagcctggcttggaagtggtgtctctttctcttatttccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatggcattacaggcatgctaagcctggcttggaagtggtgtctctttctcttatttccc 260
Query: 61 ctctctttcaaa-ttgtgtgtctgtgtctgtgtatgtgcatgtacatgcacacgagtata 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctctttcaaaattgtgtgtctgtgtctgtgtatgtgcatgtacatgcacacgagtata 320
Query: 120 tgcatgtcacagtgcatgcatggaagtcaaatgacaactttgggcgttggttctcatctt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcatgtcacagtgcatgcatggaagtcaaatgacaactttgggcgttggttctcatctt 380
Query: 180 ccactgtgtagatcctagggattggctttgggtcatcaggctggactgcaagtgccttta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccactgtgtagatcctagggattggctttgggtcatcaggctggactgcaagtgccttta 440
Query: 240 cacactgacctgtcttgccagctccgcaactccaaaagcgccttttaaagtttatttatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacactgacctgtcttgccagctccgcaactccaaaagcgccttttaaagtttatttatt 500
Query: 300 ttcattttctgtgtatgagtgttttgcctgcatgtatgtctattcttcatgtgcgtgtct 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 ttcattttctgtgtatgagtgttttgcctgcatgtatgtatattcttcatgtgcgtgtct 560
Query: 360 gttgcctacagat 372
|||||||||||||
Sbjct: 561 gttgcctacagat 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 773
Length adjustment: 9
Effective length of query: 363
Effective length of database: 764
Effective search space: 277332
Effective search space used: 277332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no298_f19.g1 MSMg01no298_f19.g1 CHROMAT_FILE:
MSMg01no298_f19.g1 PHD_FILE: MSMg01no298_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:02 2005
(245 letters)
>mm_chr3_65987563_65988207
Length = 645
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Minus
Query: 1 ctaggccagccagtgatacatagtgagaacctgtcaaaagaaaaaataataagttaaata 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 490 ctaggccagccagtgatacatagtgagaacctgccaaaagaaaaaataataagttaaata 431
Query: 61 aataacactccttcccttcattgtttcaatgaaattaaattgtgattgggaaatgggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aataacactccttcccttcattgtttcaatgaaattaaattgtgattgggaaatgggagc 371
Query: 121 ttactggacattaggcttggcttaatggtatcttagaagactctgttactatacaagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttactggacattaggcttggcttaatggtatcttagaagactctgttactatacaagaag 311
Query: 181 acggtgttgagaaagcatctcaggaagctgtaggtccagtgggcaaggacactatgattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 acggtgttgagaaagcatctcaggaagctgtaggtccagtgggcaaggacactatgattt 251
Query: 241 acca 244
||||
Sbjct: 250 acca 247
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
