Query= MSMg01no302_b17.b1 MSMg01no302_b17.b1 CHROMAT_FILE:
MSMg01no302_b17.b1 PHD_FILE: MSMg01no302_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:40 2005
(318 letters)
>mm_chr3_119052005_119052722
Length = 718
Score = 605 bits (313), Expect = e-178
Identities = 313/313 (100%)
Strand = Plus / Minus
Query: 5 gaattctaatacatcttaatatattatgatgtgatacatgtatattatctatgtaataca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaattctaatacatcttaatatattatgatgtgatacatgtatattatctatgtaataca 458
Query: 65 gatacatactagagtctctggaatatgtgtagtatcttctttatatatgataatcacata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gatacatactagagtctctggaatatgtgtagtatcttctttatatatgataatcacata 398
Query: 125 taatattaatgccatgtatggtttcaaggttttgtcctctcaagatatagcgtgcctgat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 taatattaatgccatgtatggtttcaaggttttgtcctctcaagatatagcgtgcctgat 338
Query: 185 actgtctcctttttaaagcttacgttcagatggttcttgtgcttgtttcccactgatgaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 actgtctcctttttaaagcttacgttcagatggttcttgtgcttgtttcccactgatgaa 278
Query: 245 gtagaattttaaatataacttgtcttatttttatctgtcctcaatttgagtgtgtcctag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gtagaattttaaatataacttgtcttatttttatctgtcctcaatttgagtgtgtcctag 218
Query: 305 ctcattgaactta 317
|||||||||||||
Sbjct: 217 ctcattgaactta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no302_b17.g1 MSMg01no302_b17.g1 CHROMAT_FILE:
MSMg01no302_b17.g1 PHD_FILE: MSMg01no302_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:40 2005
(636 letters)
>mm_chr3_118892123_118893158
Length = 1036
Score = 1162 bits (601), Expect = 0.0
Identities = 628/637 (98%), Gaps = 1/637 (0%)
Strand = Plus / Plus
Query: 1 attgaaatgccatcttctaagaaatccatttcgaaaagaattgtacagactgaaaattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgaaatgccatcttctaagaaatccatttcgaaaagaattgtacagactgaaaattac 260
Query: 61 cgggtaaattggagagaaatttttcttcaagtcaaaaacttcacttgtattttagctcct 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgggtaaattggagagaaatgtttcttcaagtcaaaaacttcacttgtattttagctcct 320
Query: 121 tgagaagtgcacatagcctcactctggagtgcttttctttgaaaggtggtgtggggaggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagaagtgcacatagcctcactctggagtgcttttctttgaaaggtggtgtggggaggt 380
Query: 181 ctcactgctgagatctgcaaccagtgcctgacaagtagcaggggtggcatcccaaggacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcactgctgagatctgcaaccagtgcctgacaagtagcaggggtggcatcccaaggacc 440
Query: 241 tgtgacatggaagggcaggttctatgtgcagagagctagagactctgcagttactagaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgacatggaagggcaggttctatgtgcagagagctagagactctgcagttactagaat 500
Query: 301 tagaagttcatcgcttaatttagaaaggaaagcttacagtccttgttacacagtgaaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagaagttcatcgcttaatttagaaaggaaagcttacagtccttgttacacagtgaaaac 560
Query: 361 tatgcaaggtgcaagtgcagccttagattttctcatctatacttggtcatttgtagttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgcaaggtgcaagtgcagccttagattttctcatctatacttggtcatttgtagttaa 620
Query: 421 ttatccaagagaaatacactgtgggtgaaagtagactcttctctatgaatacttctgtcc 480
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 621 ttctccaagagaaatacactgtgggtgaaagtagattcttctctatgaatacttctctcc 680
Query: 481 ttccttctatttctgtcttccgtctttccattgagtcagagtctacgtagcctttggtgg 540
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 681 ttccttctatttctgtcttccgtctttccattgagtcagagtctatgttgcctttggtgg 740
Query: 541 gtctgatacacactaaatagtcaa-ggtggccctgaactcagggcagtccttctgcctca 599
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 741 gcctgatacacactaaatagtcaaaggtggccctgaactcagggcagtccttctgcctca 800
Query: 600 agactctcaagtgctgggatttcatgcacacattgcc 636
|||||||||||||||||||||||||||| ||||||||
Sbjct: 801 agactctcaagtgctgggatttcatgcatacattgcc 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
