TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGG
AATTCTTTTAGTATTGGCGAGAGATACTCCCCAGTTGGGTTAGGTCTACT
TAGGCTACAGATGGACAGTATTAATTTATAAAGTTATTACTGTTTCTGAG
TTCAATTTCCTTATACTCCCTGAAGTAATTAGTAATTATGCAATTCTCAG
AAACAGTGTAAAATAATTGTAGTGACATTTTTGGAGTTTTGGTTTCTTTG
AGAAACTCAGAGGTATTATGGGAAAGTGTTTTCATTTTGATCCCAGGTGT
GGGATATGAGGCTGCTTTGGATTGCCCATGGCAGCTGACTATGATTTGTC
TCGTGCTCTGGTGGAGATGTGATTTTGCCAGCTGCAGATAGTTTCTGTGA
TTGTGTGATGCTTGGAATTCCCCCCACCCCGAAGAGATTATTTTAATGCT
AGAACCCCAATAGGTGAGTTGGTGGTGGACTGTTGGTTGTTTGAACXXXX
XXXXXXXXXXXXXXXXXXXTACACATTACTCGACCCGCTGATTACCCACA
ACATCCCATCTCATGCTATTCCAGCGAGCATATTGTTTCCCACTTACCCT
CTCTATGCTTCTCGTACTCTGATTCATTTCCCCCCTTAATTCACCCCTAC
GGCTTTAACCCCCACTTATTTCACTTCCCCGCTTATTCTTTAATCCTTCT
TCCCGTCTCCTTCTTCCCTCCGTCCTATT

ACGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGCA
GAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCATAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACACTCTTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAA
ATAAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACTGGAGGATC
CCGCAATACCTCTCCTGGGTTTATATCCAGAAGATGCTCCAACTGCTAAG
AAAGTCATATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGCAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTAGTGCATTTACACAATGCAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGGCAAATGGTTGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACCCAATCACAAAAGAACTCACATGATATGTACTCACTGATAT
GTTAATAATAGCCCAGAAACTTAGAATACCCAAGATATAAGATACATTTT
GTTGAACACATGAAAACTCAGAAGAA

Query= MSMg01no311_i24.b1 MSMg01no311_i24.b1 CHROMAT_FILE:
MSMg01no311_i24.b1 PHD_FILE: MSMg01no311_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:26 2005
         (380 letters)



>mm_chr3_67665587_67666366
          Length = 780

 Score =  648 bits (335), Expect = 0.0
 Identities = 362/371 (97%), Gaps = 1/371 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcttttagtattggcgagagatactccccagttgggttaggtctacttaggctaca 66
           |||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 207 gaattcttttagtattggggagagatactccccaattgggttaggtctacttatgctaca 266

                                                                       
Query: 67  gatggacagtattaatttataaagttattactgtttctgagttcaatttccttatactcc 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gatggacagtattaatttataaagttattactgtttctgagttcaatttccttatactcc 326

                                                                       
Query: 127 ctgaagtaattagtaattatgcaattctcagaaacagtgtaaaataattgtagtgacatt 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctgaagtaattagtaattatgcaattctcagaaacagtgtaaaataattgtagtgacatt 386

                                                                       
Query: 187 tttggagttttggtttctttgagaaactcagaggtattatgggaaagtgttttcattttg 246
           ||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||
Sbjct: 387 tttggagttttggtttctttgagaaactcagaggtattatgggaatgtgtttttgttttg 446

                                                                       
Query: 247 atcccaggtgtgggatatgaggctgctttggattgcccatggcagctgactatgatttgt 306
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 447 atcccaggtgtgggatatgaggctgctttggattgcccatggcagctgactatgattt-t 505

                                                                       
Query: 307 ctcgtgctctggtggagatgtgattttgccagctgcagatagtttctgtgattgtgtgat 366
           |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 506 ctcgtgctctggtggagatgtgattttgccagcttcagatagtttctgtgattatgtgat 565

                      
Query: 367 gcttggaattc 377
           |||||||||||
Sbjct: 566 gcttggaattc 576


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space:   286041
Effective search space used:   286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)