Query= MSMg01no313_e06.b1 MSMg01no313_e06.b1 CHROMAT_FILE:
MSMg01no313_e06.b1 PHD_FILE: MSMg01no313_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:45 2005
(747 letters)
>mm_chr3_50773502_50774648
Length = 1147
Score = 1423 bits (736), Expect = 0.0
Identities = 744/747 (99%)
Strand = Plus / Plus
Query: 1 tgccacataaatgtggnactgaatatggcattgaaagaatggggcggtgttgacagatgg 60
|||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 201 tgccacataaatgtggtactgaatatggaattgaaagaatggggtggtgttgacagatgg 260
Query: 61 ccaggttatctgggctagttgtagacatctgcattttcttttctacattattttctccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaggttatctgggctagttgtagacatctgcattttcttttctacattattttctccac 320
Query: 121 gttctaaactcaacgctgtatccactgcatctccactactagccaacatagacctaacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttctaaactcaacgctgtatccactgcatctccactactagccaacatagacctaacca 380
Query: 181 aaatcatggctctctaaaaataaagaaaaccttggtagaaagtccagatttgatcattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatcatggctctctaaaaataaagaaaaccttggtagaaagtccagatttgatcattct 440
Query: 241 tgcatgtttaatggtaacttgagtctactttcaatggaagagaagactgtcaacccctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcatgtttaatggtaacttgagtctactttcaatggaagagaagactgtcaacccctag 500
Query: 301 acgtggtgctaatcttattattaacatttagtactaacaaagtaccatggtttgtggttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acgtggtgctaatcttattattaacatttagtactaacaaagtaccatggtttgtggttt 560
Query: 361 cttcatgcctccttctcaccccccaccccttggaagacaatgagaacttgacaagagagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcatgcctccttctcaccccccaccccttggaagacaatgagaacttgacaagagagc 620
Query: 421 atgcagctactttgcaaggcggctcacctagcactcatggtagaaagaacacgagtttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgcagctactttgcaaggcggctcacctagcactcatggtagaaagaacacgagtttga 680
Query: 481 ggctaaggtaggctacataatgagactttgtctttaaaagacaactttaaggccatagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggctaaggtaggctacataatgagactttgtctttaaaagacaactttaaggccatagtt 740
Query: 541 agcatacagcattgcttgctttctttcatgagaagatggccttctaaatagggcatctac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agcatacagcattgcttgctttctttcatgagaagatggccttctaaatagggcatctac 800
Query: 601 atgatggcgtccagagttcttggaggagggggaaggaagaagaatgtaagagacaaatgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atgatggcgtccagagttcttggaggagggggaaggaagaagaatgtaagagacaaatgg 860
Query: 661 tgggaaaacagctatggaacactggcttctggatatgacatggctctcatactgtttgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 tgggaaaacagctatggaacactggcttctggatatgacatggctctcatactgtttgtt 920
Query: 721 attctcacagcagttgtggctatgggc 747
|||||||||||||||||||||||||||
Sbjct: 921 attctcacagcagttgtggctatgggc 947
Score = 80.0 bits (41), Expect = 7e-19
Identities = 41/41 (100%)
Strand = Plus / Minus
Query: 170 agacctaaccaaaatcatggctctctaaaaataaagaaaac 210
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 agacctaaccaaaatcatggctctctaaaaataaagaaaac 1107
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 747
Length of database: 1147
Length adjustment: 10
Effective length of query: 737
Effective length of database: 1137
Effective search space: 837969
Effective search space used: 837969
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no313_e06.g1 MSMg01no313_e06.g1 CHROMAT_FILE:
MSMg01no313_e06.g1 PHD_FILE: MSMg01no313_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:45 2005
(334 letters)
>mm_chr3_50865173_50865906
Length = 734
Score = 607 bits (314), Expect = e-178
Identities = 329/334 (98%)
Strand = Plus / Minus
Query: 1 accatctcccgcctcttggtagaaggaccatcctggatttgcttcaaggcgaatactcac 60
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 accatctcaagcctcttggtagaaggaccatcctggatttgcttcaaggcgaatactcac 475
Query: 61 ccttcttcattctgcaaaaccttgttaatctggtgctccttaacagaattccaccgagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ccttcttcattctgcaaaaccttgttaatctggtgctccttaacagaattccaccgagct 415
Query: 121 tctagaagacaagggctggatggataatgggcttcggagggaattatctatgaagaaggg 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tctagaaggcaagggctggatggataatgggcttcggagggaattatctatgaagaaggg 355
Query: 181 gagcacacctgtaagaaatgcacatgaaattttggttctttctcacttcagaactatatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gagcacacctgtaagaaatgcacatgaaattttggttctttctcacttcagaactatatg 295
Query: 241 tgggtggtctgaccatactgtagtcacagatagaggtgatgatgagggacacaggggaaa 300
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct: 294 tgggtggtctgaccatactgtagtcacagatacaggtgatgaggagggacacaggggaaa 235
Query: 301 ggaatgattttctctccctgaattcttacgttaa 334
||||||||||||||||||||||||||||||||||
Sbjct: 234 ggaatgattttctctccctgaattcttacgttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
