Query= MSMg01no316_b04.b1 MSMg01no316_b04.b1 CHROMAT_FILE:
MSMg01no316_b04.b1 PHD_FILE: MSMg01no316_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:44 2005
(343 letters)
>mm_chr3_127708318_127709060
Length = 743
Score = 648 bits (335), Expect = 0.0
Identities = 341/343 (99%)
Strand = Plus / Plus
Query: 1 gacaagccatgcactcttgtaggagaaaggaatgctttttcccttctaaaaccatgctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 gacaagccatgcactcttgtaggagaaaggaatgctttttcccttctaaaaggatgctgc 260
Query: 61 atctatgtattatgtcttgctggaaaaaaaaatcaactcactgtggattaaaaggaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctatgtattatgtcttgctggaaaaaaaaatcaactcactgtggattaaaaggaagag 320
Query: 121 aaaggtgttataactgacagtggtacttcatgggactcaaagctaagatggaaggaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaggtgttataactgacagtggtacttcatgggactcaaagctaagatggaaggaattc 380
Query: 181 caaggaaggccaaggtctgtgaccgtgttagaaacacaagcagcctgtctcagttgaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaggaaggccaaggtctgtgaccgtgttagaaacacaagcagcctgtctcagttgaccc 440
Query: 241 tcgcacaagagtcttcttatccactcaagatctgctttctttgccctcagggtcacccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcgcacaagagtcttcttatccactcaagatctgctttctttgccctcagggtcacccca 500
Query: 301 acagtgagagatgacataggggtgtgctcttagggtcacccca 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acagtgagagatgacataggggtgtgctcttagggtcacccca 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_b04.g1 MSMg01no316_b04.g1 CHROMAT_FILE:
MSMg01no316_b04.g1 PHD_FILE: MSMg01no316_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:44 2005
(294 letters)
>mm_chr3_127886494_127887186
Length = 693
Score = 526 bits (272), Expect = e-154
Identities = 287/292 (98%), Gaps = 1/292 (0%)
Strand = Plus / Minus
Query: 1 catgctctgaggtgaggccaaaccagtgcatcaccgctgccctggttacacacactttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 catgctctgaggtgaggccaaaccagtgcatcaccgctgccctggttacacacactttat 432
Query: 61 ggaaagtgtgatcaaattgaggtaactgttagttaatagtgtacacattactttattcta 120
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 431 ggaaagtgtgatcaaattgaggtaactgttagttaacagtgtacacactactttattcta 372
Query: 121 taggttgaatcatgttttaattcagtcctgttgtgagtcataagaaagtcatgtgtagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 taggttgaatcatgttttaattcagtcctgttgtgagtcataagaaagtcatgtgtagat 312
Query: 181 ataggtctttttaataagtatctaacatggagaagttgtattattttttcagataaaaac 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ataggtctttctaataagtatctaacatggagaagttgtattattttttcagataaaaac 252
Query: 241 tatattttaaaattaggaagcacatgaaccctgcagaatgaagccatatcac 292
|||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tatattttaaaa-aaggaagcacatgaaccctgcagaatgaagccatatcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 693
Length adjustment: 9
Effective length of query: 285
Effective length of database: 684
Effective search space: 194940
Effective search space used: 194940
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
