CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTCCCTTATGACCTGACATGACTTGCACCTTGCTCTATACTGAT
TACAGACACACAGTCAGTACTCACAATGATAGTTCATTTCCCTCCTCCCC
TTCAGCATTTCTTAGCTGCTTCATACTACTTTGCCATAGTCATTCTCTGC
CTTCCCTTTAGCAGGGATGTTGTCTTGGAATACTTAGCTGTTCTGAATTA
TTTCTTTATAGCTGAGCAACTACCTTGACACTGTAATTGATTCAAACTGA
ACAGAAACAAATTTCTGTGCATGGATCTAAAAGCCATATCCAAATATTTC
AGAAAACATATTTAGCAATCTGATAAACACATAAGCTTTGGAGTCACTCT
GCCTAAACCTTTGGGAAGCATATGTCTCTTATTTTTTTTAAATATTTTTA
GACCATGTCATACACAGAGGAAATGTGTTAGAACAACTTGTTAGAGTTGT
TCAGCTAAACTGTTCCATTAAAAACCCACTTCAAATGGGAACAAATGCGT
GAGAGAAGAAAGTAGAGGAGGAGAAATGAGGATGGGACATAAGAATGCAT
ACATATGANAGTGCCACAGCACATCGTATTGCTTTGTATCTTAATTTGAA
AACAAAACAAAATAAAACAAACAAAAAACCAGGCTGTGAAAGTAGAAATG
CGGTTCTAATGCTGCAAACAGATACATAAAGAGGGTTTT

CATAAATAATGGAAAGAGGGGAGGGAATTCTCAAAAAGAGGGGGGCGANG
GAATATTCCCCAAAGGAAGTCAAAGAGAAAGTGTTTGTGGGTTGTTTGGG
AGATCTCCGCTCGAATTAATCCTTCCCTATTTAAGTGCCCCCTGGTTCTT
TTTTTTTCTTACTCCCTTGTTGGTACTCTGGCGGTTCCTTTTTTCCGTGG
AATAATATTCGTAACACAGCGACGAGATAACGACTTTCTTCTGCCAGATG
GCGGGCCTGTGCGGTGTGTGGGTGACCGGTGACGGTTTGCGTAAATACAA
AGGTGATATTTCCGCGTGGCGGGATAGCAAGAATCGGACAATAATTATAC
CTCCCTACCCTTAGTATTTTTAGAGAAAAGTGTCCCGCCCCCCCAAGATA
AACAATAATCATCTATGACAAGACGGGATGTGTTGCGCCCGTATGTTGCT
CTGCGCCCTTATGCATTAATGTAGGCGCGCGCGCGGGACCGAATTCTGGT
GTTACCCGGCCCCCGCGTATTATATAACGAGGCCGGAGTGATAGGCGCAC
ACGCGGGCGATCATTTAGATGCACATCGGGGTCAAGAAGAAGAGAGAATA
GGGGAAGAGAAAGGGGCTGTAATTTTGAAAGGATAGTTGAGAGCACGGAG
TTGGTCGAAAATATATGGATAGAGAATTCGCCACGAAAGAAGCAGCGGAT
GATTATAAACCGCGATTTTTGATTTTAGTGTTTGGGTTCGGTGGTGGTCT
GAGTGAGCGCGGGATGGGCCGGTGTGAGGAGGTAAGT

Query= MSMg01no317_k13.b1 MSMg01no317_k13.b1 CHROMAT_FILE:
MSMg01no317_k13.b1 PHD_FILE: MSMg01no317_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:41 2005
         (653 letters)



>mm_chr3_67026529_67027581
          Length = 1053

 Score = 1067 bits (552), Expect = 0.0
 Identities = 575/583 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattcccttatgacctgacatgacttgcaccttgctctatactgattacagacac 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 gaattcattcccttaggacctgacatgacttgcaccttgctctatactgattacagacac 524

                                                                       
Query: 65  acagtcagtactcacaatgatagttcatttccctcctccccttcagcatttcttagctgc 124
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 acagtcagtactcagaatgatagttcatttccctcctccccttcagcatttcttagctgc 464

                                                                       
Query: 125 ttcatactactttgccatagtcattctctgccttccctttagcagggatgttgtcttgga 184
           ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 463 ttcatactactttgccatagtcactctctgccttccctttagcagggatgtagtcttgga 404

                                                                       
Query: 185 atacttagctgttctgaattatttctttatagctgagcaactaccttgacactgtaattg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 atacttagctgttctgaattatttctttatagctgagcaactaccttgacactgtaattg 344

                                                                       
Query: 245 attcaaactgaacagaaacaaatttctgtgcatggatctaaaagccatatccaaatattt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 attcaaactgaacagaaacaaatttctgtgcatggatctaaaagccatatccaaatattt 284

                                                                       
Query: 305 cagaaaacatatttagcaatctgataaacacataagctttggagtcactctgcctaaacc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cagaaaacatatttagcaatctgataaacacataagctttggagtcactctgcctaaacc 224

                                                                       
Query: 365 tttgggaagcatatgtctcttattttttttaaatatttttagaccatgtcatacacagag 424
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tttgggaagtatatgtctcttattttttttaaatatttttagaccatgtcatacacagag 164

                                                                       
Query: 425 gaaatgtgttagaacaacttgttagagttgttcagctaaactgttccattaaaaacccac 484
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 163 gaaatgtgttagaacaacttgttagagttgttcagctaaacttttccattaaaaacccac 104

                                                                       
Query: 485 ttcaaatgggaacaaatgcgtgagagaagaaagtagaggaggagaaatgaggatgggaca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 103 ttcaaatgggaacaaatgcgtgagagaagaaagtagaggaggagaaatgaggacgggaca 44

                                                      
Query: 545 taagaatgcatacatatganagtgccacagcacatcgtattgc 587
           ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 43  taagaatgcatacatatgaaagtgccacagcacatcgtattgc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space:   670649
Effective search space used:   670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)