Query= MSMg01no324_l09.b1 MSMg01no324_l09.b1 CHROMAT_FILE:
MSMg01no324_l09.b1 PHD_FILE: MSMg01no324_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:05 2005
(587 letters)
>mm_chr3_4619587_4620573
Length = 987
Score = 1098 bits (568), Expect = 0.0
Identities = 579/583 (99%)
Strand = Plus / Plus
Query: 5 gaattcatttccactagccaacagatttttctatacatttcactagcatactttcttcat 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttccacaagccaacagatttttctatacatttcactagcatactttcttcat 264
Query: 65 gactaagccattacatcatcaagttttgaagtgacatcgtcaggataactgattaagaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gactaagccattacatcatcaagttttgaagtgacatcgtcaggataactgattaagaag 324
Query: 125 ttacaaactcatcccacagagaagttagaaacagtgtatagatcagaataccactcagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttacaaactcatcccacagagaagttagaaacagtgtatagatcagaataccactcagga 384
Query: 185 atttctgatcaactgagaggtgacaagaccacaaaaaatagagaactgtgacctaggaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atttctgatcaactgagaggtgacaagaccacaaaaaatagagaactgtgacctaggaca 444
Query: 245 ctaaataaaactctataaattatcctcaaaagtacaaaaactgtaatatgtttgacaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctaaataaaactctataaattatcctcaaaagtacaaaaactgtaatatgtttgacaaaa 504
Query: 305 tatgcaaaataaagcttgcaagatgactcaggttgtgaaacacagaccatgcagacctga 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatgcaaaataaagcttgcaagatgactcaggttgtgaaacacagaccatgcagacctgc 564
Query: 365 cttctttagctcaaacccttgagatcacaaattaaataattaatttgcaataataattaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttctttagctcaaacccttgagatcacaaattaaataattaatttgcaataataattaa 624
Query: 425 taaccaataaataatataatttataattctaataaataattaacatataattaagtatat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taaccaataaataatataatttataattctaataaataattaacatataattaagtatat 684
Query: 485 tatgtaagataaagttataattagataaggttcattattataattatttcaataaaaata 544
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 685 tatgtaagataaagttataattagataaggttcattattataattatttaaataaaaata 744
Query: 545 tttgccctaatatggtcaaagaactaanagagtatagaaacta 587
||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 745 tttgccctaatatggtcaaagaactaaaagagtatagaaacta 787
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_l09.g1 MSMg01no324_l09.g1 CHROMAT_FILE:
MSMg01no324_l09.g1 PHD_FILE: MSMg01no324_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:05 2005
(539 letters)
>mm_chr3_4717412_4718350
Length = 939
Score = 567 bits (293), Expect = e-166
Identities = 296/297 (99%)
Strand = Plus / Minus
Query: 243 atcattctcactaaaatctctacgtagtatgacaaaagaagaataggaataaaaatacaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 atcattctcactaaaatctctacgtagtatgacaaaagaagaataggaataaaaatacaa 840
Query: 303 ataagataaattaattaattagttaattaagacaggcagtcatacaggaaggaaggaagg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 ataagataaattaattaattagttaattaagacaggcagtcatacaggaaggaaggaagg 780
Query: 363 aaagaagggagaaggaaagggagagatggaaaggaaggaattttggaagaatattcctca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 aaagaagggagaaggaaagggagagatggaaaggaaggaattttggaagaatattcctca 720
Query: 423 gaatatatttatcatagttcataaaaaccaatagatggtatttttacaaattatatattg 482
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 719 gaatatatttatcatagttcataaaaaccaatagatggtaattttacaaattatatattg 660
Query: 483 atccatgtaattaattctctgtttaattatatttaagaaaaaagaattaactaattg 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 atccatgtaattaattctctgtttaattatatttaagaaaaaagaattaactaattg 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
