Query= MSMg01no328_l15.b1 MSMg01no328_l15.b1 CHROMAT_FILE:
MSMg01no328_l15.b1 PHD_FILE: MSMg01no328_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:57 2005
(170 letters)
>mm_chr3_142482640_142483209
Length = 570
Score = 313 bits (162), Expect = 3e-90
Identities = 168/170 (98%)
Strand = Plus / Minus
Query: 1 ctgtgctcagctattgagtaatatacagtctatttgtatattgtgtagtgaactgtatgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 370 ctgtgctcagctattgagtaatatacagtctatttgtatattgtgtagtgaattgtatgt 311
Query: 61 tgagtaatattcaatctatttactgaagtgattcttctgtcccaagatttgtatactcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 310 tgagtaatattcaatctatttactgaagtgattcttctgtcccaagatttgtatacttga 251
Query: 121 ttttgaacagagctcttacacttcattttcctagctgccattctgtcaaa 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttttgaacagagctcttacacttcattttcctagctgccattctgtcaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 170
Length of database: 570
Length adjustment: 8
Effective length of query: 162
Effective length of database: 562
Effective search space: 91044
Effective search space used: 91044
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no328_l15.g1 MSMg01no328_l15.g1 CHROMAT_FILE:
MSMg01no328_l15.g1 PHD_FILE: MSMg01no328_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:57 2005
(346 letters)
>mm_chr3_142326099_142326844
Length = 746
Score = 578 bits (299), Expect = e-169
Identities = 332/347 (95%), Gaps = 10/347 (2%)
Strand = Plus / Plus
Query: 1 tgtaagaagaatcaagaggcatcctcagatcgctgttcagttctgcttcgggatattttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtaagaagaatcaagaggcatcctcagatcgctgttcagttctgcttcgggatattttt 260
Query: 61 ggtccactagaagaagacttgaagcagggtgtttttttacaaaccaacgggttgctgtct 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 ggtccactagaagaagacttgaagcagggtg-ttttttacaaaccaacgggttgctgtct 319
Query: 121 tttcagccagaagatacaggagttgaagagaaaggactatgaggaacctgggaagg---- 176
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 320 tttcagccagaagatacaggggttgaagagaaag---tatgaggaacctgggaagggcgc 376
Query: 177 -ggtaaccaaggtaaccaaggttccacatgccctgggaagtttttttaccatcaggctgc 235
|||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||
Sbjct: 377 aggtaaccaaggtaaccaaggttccgcatgccctgggaag-tttcttaccatcaggctgc 435
Query: 236 agtgtccccaggcatcactggggaaccccagcttatgctgttcgtgtatcacatacctga 295
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 436 agtgtccccaggcatcactggggaacgccagcttatgctgttcgtgtatcacatacctga 495
Query: 296 aggttttcatactggatatttcctgctcacccatcagagacagtcac 342
|||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aggtcttcatactggatatttcctgctcacccatcagagacagtcac 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
