Query= MSMg01no329_k23.b1 MSMg01no329_k23.b1 CHROMAT_FILE:
MSMg01no329_k23.b1 PHD_FILE: MSMg01no329_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:14 2005
(344 letters)
>mm_chr3_26967984_26968727
Length = 744
Score = 638 bits (330), Expect = 0.0
Identities = 339/342 (99%)
Strand = Plus / Plus
Query: 1 atttccttatgctgttattcaggtgaaagaagaatttactcatgttttctctctcatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttccttatgctgttattcaggtgaaagaagaatttactcatgttttctctctcatgtt 260
Query: 61 tatattgctcttacatttttttaaaatttaaacctctaatctttggggatttattcttgt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacattgctcttacatttttttaaaatttaaacctctaatctttggggatttattcttgt 320
Query: 121 gtatgcatggtgtgagaagatgtgggtctaatttaatcccattccaaatggctaccctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatgcatggtgtgagaagatgtgggtctaatttaatcccattccaaatggctaccctgt 380
Query: 181 tgtcaaacatttatgaaaatgctcagggatcatagtcaagatgctatttaataagctcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcaaacatttatgaaaatgctcagggatcatagtcaagatgctatttaataagctcat 440
Query: 241 ttttaaatctataaaaataaagggattatgagaatattaacagacaaaataatttaaaag 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 ttttaaatctataaaaataaagggattatgagactattaacagacaaaataatttaaaag 500
Query: 301 ataaatgcattgcaaaaaggaaacagatgaagctgaacaaaa 342
||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 ataaatgcattgcaaaaaggaaacagatgaagctgcacaaaa 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_k23.g1 MSMg01no329_k23.g1 CHROMAT_FILE:
MSMg01no329_k23.g1 PHD_FILE: MSMg01no329_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:14 2005
(258 letters)
>mm_chr3_27134189_27134846
Length = 658
Score = 431 bits (223), Expect = e-125
Identities = 250/259 (96%), Gaps = 1/259 (0%)
Strand = Plus / Minus
Query: 1 aaagtcaacctgggtaactgcagacgatcctctcttaaaccatg-aaacagaacaaaagc 59
|||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||
Sbjct: 535 aaagtcaacctgggtaactgcagatgatcctctcttaaaacatgaaaacagaacaaaagc 476
Query: 60 ctggctgtacagctcagtggtacagcatttgcctggtatatgtgagccctgagagagaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 475 ctggctgtacagctcagtggtacagcatttgcctggtatatgtgagcccccagagagaaa 416
Query: 120 gggaaggaccaagagagagagtgtgcctactgtctgctgctcaagctatgtccctggaaa 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gggaaggaccaagggagagagtgtgcctactgtctgctgctcaagctatgtccctggaaa 356
Query: 180 gcactggaaaagcgtgtcaccttatccaactcagagctagaattgtgtgtgagtgagtgt 239
|||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||
Sbjct: 355 gcactggaaaagcgtgtcaccttatccaactcagagctagaattgtgtttgtgtgtgtgt 296
Query: 240 gtgtgtgtgtgtgtgtgtg 258
|||||||||||||||||||
Sbjct: 295 gtgtgtgtgtgtgtgtgtg 277
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
