TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCTTACATTACTAGGAACTTAGGAAGAAAAGCATCTTGTTCTATG
AGCATCCTACCATGTTACAAAACTCAGGAGCTAGGATCTCGTGCCTTCAC
AAACTCGTGTCTCCATTCTGCTTGAACTCAGATAAAATATTGAGAGTCAT
TTCTTCACTCTTGGATTGTAAATTGGCCTCACTCCTCCTGGAAGCTTTCC
TGGTGGCTCGGGACAGTCTCCTTCTGAATGTATCTCCAGCCAAGAAATAA
AGAATGGGGTCCACACAGCTGTTGAGACTTGCTAGACCTCTTGTTACCTG
ATAAGTGGCATAAACCCTGTCGTTGAAATCACACATTTCTGGGGTCTGGA
AATCCAACCGTGCTCGCAAATTCATCGTTTTCATCACATGGAAAGGGATA
TAAGACACAGCAAACACCGTCAGGACAATTATCACCAGGTAAATGGATTT
CCTCCGGAGCGGAGAGTTGTCCAGGTCATTGTAAATCAAAGCTTTAACAA
TTAATCCATAACAGCCCAAGATCAGCACCAAAGGGATGCAGAACATGGCC
ACAGTCGTGCACATACTGTAGATGAAATAACTTCGCAGGTAATCATTGGA
CGTGGTGTCATAGCAGGTGACAGCTTTGTTTTTCCGATTCCAGCGCCCGA
TTTCAATAAAATAGGGGAGATGTTTTCCCTCACAATCGATCATAT

TCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATAGAAGTTGTGTTAACATGCACA
AGGATCTGTAAGCACAAACAAGACAAACATCCAATCTGGAGGAGGAAAAG
TAGGCTGAGGAGCTATTGGCAGTTTATAGCTGGGAAAGGAACAGTCTTCT
TTAAAAATGTGGACCCTAGAAGGTTGACTACATTATAGTGGATGACCACA
CAACCATGAGCATGTGAGCAGCACAAATTAACCTTGATGTATTTAAGAAA
AAAATGACATCAAATCATGGGGGTGGGGGGAGGATTTCTATCCCTCCTTC
TCTTCTCCTCCTTCTTCTTTCCGCCCCCCCCTACTTTTCTTTCTTTTTCT
TTCTCCCACTCCTCATCTCCCACTTTTTCCTTCTCCCCTTTATCCTTCCC
TTTCTAACATTCCCATTCGTCACCTCCCTCCTCCTTTTCCCCCTCCTTCC
CTTACCCTCCTGCCCTTCTCTTATCCTCTTTTTCCCCTTCTACTTCTTAT
TTTCTTACCCTCCTTTCCCCCTTTCTTTTTTCCATCCTCCATTCCTTTCC
CTCTTTTTCCCTTTTTGCTCGTTTATTTCACCATTTAACTTCCCCCATTA
CCTCCATACTATGACTCTTCCCTATCACTCCTCTTTTTTTTCCCCCTTTA
TCCCCCATTTTCACCTTTTCACCCCTTTTCTCCCCCCTCCTCTCTTTTTT
TCCTTTCTTTTACC

Query= MSMg01no329_l15.b1 MSMg01no329_l15.b1 CHROMAT_FILE:
MSMg01no329_l15.b1 PHD_FILE: MSMg01no329_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:17 2005
         (590 letters)



>mm_chr3_60807793_60808782
          Length = 990

 Score = 1133 bits (586), Expect = 0.0
 Identities = 586/586 (100%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcttacattactaggaacttaggaagaaaagcatcttgttctatgagcatccta 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gaattctcttacattactaggaacttaggaagaaaagcatcttgttctatgagcatccta 731

                                                                       
Query: 65  ccatgttacaaaactcaggagctaggatctcgtgccttcacaaactcgtgtctccattct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ccatgttacaaaactcaggagctaggatctcgtgccttcacaaactcgtgtctccattct 671

                                                                       
Query: 125 gcttgaactcagataaaatattgagagtcatttcttcactcttggattgtaaattggcct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gcttgaactcagataaaatattgagagtcatttcttcactcttggattgtaaattggcct 611

                                                                       
Query: 185 cactcctcctggaagctttcctggtggctcgggacagtctccttctgaatgtatctccag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cactcctcctggaagctttcctggtggctcgggacagtctccttctgaatgtatctccag 551

                                                                       
Query: 245 ccaagaaataaagaatggggtccacacagctgttgagacttgctagacctcttgttacct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ccaagaaataaagaatggggtccacacagctgttgagacttgctagacctcttgttacct 491

                                                                       
Query: 305 gataagtggcataaaccctgtcgttgaaatcacacatttctggggtctggaaatccaacc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gataagtggcataaaccctgtcgttgaaatcacacatttctggggtctggaaatccaacc 431

                                                                       
Query: 365 gtgctcgcaaattcatcgttttcatcacatggaaagggatataagacacagcaaacaccg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gtgctcgcaaattcatcgttttcatcacatggaaagggatataagacacagcaaacaccg 371

                                                                       
Query: 425 tcaggacaattatcaccaggtaaatggatttcctccggagcggagagttgtccaggtcat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tcaggacaattatcaccaggtaaatggatttcctccggagcggagagttgtccaggtcat 311

                                                                       
Query: 485 tgtaaatcaaagctttaacaattaatccataacagcccaagatcagcaccaaagggatgc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgtaaatcaaagctttaacaattaatccataacagcccaagatcagcaccaaagggatgc 251

                                                         
Query: 545 agaacatggccacagtcgtgcacatactgtagatgaaataacttcg 590
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 agaacatggccacagtcgtgcacatactgtagatgaaataacttcg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)