Query= MSMg01no330_a16.b1 MSMg01no330_a16.b1 CHROMAT_FILE:
MSMg01no330_a16.b1 PHD_FILE: MSMg01no330_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:41 2005
(319 letters)
>mm_chr3_128228018_128228736
Length = 719
Score = 601 bits (311), Expect = e-176
Identities = 314/315 (99%)
Strand = Plus / Minus
Query: 5 gaattcaatccacatccgctgagccacacattgaaattcttgcctttttttagctaggat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaattcaatccacatccgctgagccacacattgaaattcttgcctttttttagctaggat 460
Query: 65 gtatgtcagctcttcctttcttattttctttttgtgaacttgcggcctcagatgttagtt 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gtatgtcagctctttctttcttattttctttttgtgaacttgcggcctcagatgttagtt 400
Query: 125 aagttttactattcttcaaaagcatttatttgaaaaacatgcgaatggaaaatgaacatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 aagttttactattcttcaaaagcatttatttgaaaaacatgcgaatggaaaatgaacatg 340
Query: 185 ctaaactaattaggatatgcaaatgtggttcagagggactgccttttaagtgaatcatac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ctaaactaattaggatatgcaaatgtggttcagagggactgccttttaagtgaatcatac 280
Query: 245 ttatttgaatatacaaataaaagaaaatttgtttcagtaacaatctgggagttagttcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ttatttgaatatacaaataaaagaaaatttgtttcagtaacaatctgggagttagttcat 220
Query: 305 gtggaacaaataagg 319
|||||||||||||||
Sbjct: 219 gtggaacaaataagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_a16.g1 MSMg01no330_a16.g1 CHROMAT_FILE:
MSMg01no330_a16.g1 PHD_FILE: MSMg01no330_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:41 2005
(290 letters)
>mm_chr3_128057078_128057767
Length = 690
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%)
Strand = Plus / Plus
Query: 1 attgccacttaatgacataggcaatgaagagatactaaaattaactctttccaaagtagt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 attgccacttaatgacataggcaatgaagagatactaaaattaactcttttcaaagtagt 260
Query: 61 ttttctaatgagtggttcttggttctcaaaaatagtaaatgccataggctttgaagtata 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 ttttctaatgagtggttcttggttctcaaaaatagtaaatgccataggctgtgaagtata 320
Query: 121 aaacaaaacaaaacagctacataaaggacacagagcaagtggatatttcaggttaggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacaaaacaaaacagctacataaaggacacagagcaagtggatatttcaggttaggtaa 380
Query: 181 gttcttgtaaagttcttctaaacatattttgaaaaatagtttatgacctgtgaaaagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttcttgtaaagttcttctaaacatattttgaaaaatagtttatgacctgtgaaaagttg 440
Query: 241 tcaaattatctgataccttaatagtgaaatcatttaatcttattatatg 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaaattatctgataccttaatagtgaaatcatttaatcttattatatg 489
Score = 95.5 bits (49), Expect = 4e-24
Identities = 49/49 (100%)
Strand = Plus / Minus
Query: 147 gacacagagcaagtggatatttcaggttaggtaagttcttgtaaagttc 195
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 gacacagagcaagtggatatttcaggttaggtaagttcttgtaaagttc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
