Query= MSMg01no330_f07.b1 MSMg01no330_f07.b1 CHROMAT_FILE:
MSMg01no330_f07.b1 PHD_FILE: MSMg01no330_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:01 2005
(319 letters)
>mm_chr3_88648486_88649204
Length = 719
Score = 557 bits (288), Expect = e-163
Identities = 315/336 (93%), Gaps = 20/336 (5%)
Strand = Plus / Plus
Query: 4 ggaattccatatgaagatcagactggcctccaacttccagtgttcccctgaatttggcct 63
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatatgaagatcagactggcttccaacttccagtgttcccctgaatttggcct 263
Query: 64 cccaagtgatgggatcagtcgttccatagactacctgccctgacaacctgattgtttaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cccaagtgatgggatcagtcgttccatagactacctgccctgacaacctgattgtttaca 323
Query: 124 ttttcttttgatagtaaaaatgtaatggttccctgtatatttattcatttactctgtaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttttcttttgatagtaaaaatgtaatggttccctgtatatttattcatttactctgtaaa 383
Query: 184 aataaattagagtcaggaatgtttgttttgcttttatttatttattt-tttattt----- 237
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 384 aataaattagagtcaggaatgtttgttttgcttttatttatttatttatttatttattta 443
Query: 238 --------------ttttgaggcctagccttgctatgtagcccaaggtttaaactcacta 283
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttatttatttattttttgaggcctagccttgctatgtagcccaaggtttaaactcacta 503
Query: 284 tcctgcctcagcctccacagtgctagggttacagat 319
||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcctgcctcagcctccacagtgctagggttacagat 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_f07.g1 MSMg01no330_f07.g1 CHROMAT_FILE:
MSMg01no330_f07.g1 PHD_FILE: MSMg01no330_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:01 2005
(294 letters)
>mm_chr3_88739755_88740448
Length = 694
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%)
Strand = Plus / Minus
Query: 1 acctcagtgttacaacaagcattgaaaaaccagatgattccagaacactgaaacattttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acctcagtgttacaacaagcattgaaaaaccagatgattccagaacactgaaacattttc 430
Query: 61 ttttgtagttggacccgaggtgttttttgcacatgagtgttcaagcgactcagaacagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttttgtagttggacccgaggtgttttttgcacatgagtgttcaagcgactcagaacagtc 370
Query: 121 aggttccagctgagcgtcccagaactgtttcccgcaccagtgacagtgacccggtaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aggttccagctgagcgtcccagaactgtttcccgcaccagtgacagtgacccggtaagtt 310
Query: 181 gctgatgtgcatgggtttcagagattataatttgtgttgccatattactccttttacatg 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gctgatgtgcgtgggtttcagagattataatttgtgttgccatattactccttttacatg 250
Query: 241 tcaggatactggtttttatatattggtcttttgttgttgggtttttttt 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tcaggatactggtttttatatattggtcttttgttgttgggtttttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
