TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGGCCATCCCGGAATACAGAGCTAGTTCCAGGACAGCCAAGGCT
ACACAATGAAACCTTGTCTTGAAAACAACAACAAAATAACCAAAGCCACA
AAAATACCTCACACATATTACCTTCTTTCTTGGTGTTTTATATTTTGTTT
TATATATATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATATATATATATATATATATATATATATATATATATATA
TATATATATATATATATATATATATATATATAGATATATATATATATAGA
TATATANAATGTTATTAAAACCANAAGTGTGTGTGTGTATATGGAGGGAT
ATAAGAGAGNGTAAATTATATAAAAATATTNNTTTAAAGGAAAANNNNNN
NTTTTTTTTNTTTTNTTTNNTTTNNTGGGGGTNGTGTTGTATTGNNGANT
TTGGTTTGANTTTGTTGTTTTTTGAGGTCAAGGGGGGGGTAAGGGGGGGA
TTGTGGGGTTTGAGAGTGATAGGGAGGGGGGTAAAAGAGAGTAAATAGAG
AAGGNAAAANANAAAAANANNNNNNNNNAGAAAAGGGGNNGGGGTNGGAG
AGGGGGGGATTGGTAGGGGGGGG

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGTTGCCTCTGTGCGAGATACAGA
TCAAGGCAGCTCGAGAGGTAAGGCTTGATTTTCCAGGCTGCAGATCTGAT
CTCTCCTTGAGGACAGTGTCGTAAAGGGGCAGCCCAAGGTCTAAACCTGG
AATATGCTGTGCCTGAAAGTAATGTCTCCAGCACAAGAAACCAAGGTGAA
AAGGTGGTCACTCAGTGTGGGTAACTGAGTGTTACCCACTCAGTTTTGTT
TCTGTATTGTTTCCTGGCTGTTCTGGAACTCAATCTGTAGACCAGGCTAG
CAATGACCTCAGAGACCCATCTGCCTCTCTTTCCCCAGTGCTGGGATTAA
AGGCGTGCTAATAAAGTGATGTTATCTCAGATATCAGAACCCAAAATCAC
TTGGTTTGTTTTGTTTTGTTTTAATTTAAAATTTTTTGGATTAGGATGAA
AAAAAGAAAGAAAGATTAAATCAAATTAGATCATTTAAGAATTCTGACCT
TGAGCCCGGTGTGGTGGCCTTTGATCTCAGCACTCGGGAGGCAGAGGAAG
GCAGATTTCTGAGTTCGAGGTCAGCCTGGTCTACAAAGTGAGTTCCAGGA
CAGCCAGGGCTATACAGAGAAACCCTGTCTCANAAAAACCAAACCAAACC
AGAACAAATCAAAACN

Query= MSMg01no333_b14.g1 MSMg01no333_b14.g1 CHROMAT_FILE:
MSMg01no333_b14.g1 PHD_FILE: MSMg01no333_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:11 2005
         (606 letters)



>mm_chr3_103037637_103038643
          Length = 1007

 Score = 1073 bits (555), Expect = 0.0
 Identities = 596/613 (97%), Gaps = 7/613 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgttgcctctgtgcgagatacagatcaaggcagctcgagaggtaaggcttgattttcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgttgcctctgtgcgagatacagatcaaggcagctcgagaggtaaggcttgattttcca 260

                                                                       
Query: 61  ggctgcagatctgatctctccttgaggacagtgtcgtaaaggggcagcccaaggtctaaa 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 ggctgcagatctgatctctccttgaggacagtgtcgtaaagtggcagcccaaggtctaaa 320

                                                                       
Query: 121 cctggaatatgctgtgcctgaaagtaatgtctccagcacaagaaaccaaggtgaaaaggt 180
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 cctggaatatgctgtgcctgaaagtaatgtcttcagcacaagaaaccaaggtgaaaaggt 380

                                                                       
Query: 181 ggtcactcagtgtgggtaactgagtgttacccactcagttttgtttctgtattgtttcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtcactcagtgtgggtaactgagtgttacccactcagttttgtttctgtattgtttcct 440

                                                                       
Query: 241 ggctgttctggaactcaatctgtagaccaggctagcaatgacctcagagacccatctgcc 300
           ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 441 ggctgttctggaactcaatctgtagaccaggctagcattgacctcagagaaccatctgcc 500

                                                                       
Query: 301 tctctttccccagtgctgggattaaaggcgtgctaataaagtgatgttatctcagatatc 360
           |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 501 tctctttccccagtgctgggattaaaggggtgctaataaaatgatgttatctcagatatc 560

                                                                       
Query: 361 agaacccaaaatcacttggtttgttttgttttgttttaatttaaaattttttggattagg 420
           ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaacccaaaatcacgtgttttgttttgttttgttttaatttaaaattttttggattagg 620

                                                                       
Query: 421 atgaaaaaaa-gaaagaaagattaaatcaaattagatcatttaagaattctgaccttgag 479
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgaaaaaaaagaaagaaagattaaatcaaattagatcatttaagaattctgaccttgag 680

                                                                       
Query: 480 cccggtgtggtggc------ctttgatctcagcactcgggaggcagaggaaggcagattt 533
           ||||||||||||||      ||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cccggtgtggtggcgcacgcctttgatctcagcactcgggaggcagaggaaggcagattt 740

                                                                       
Query: 534 ctgagttcgaggtcagcctggtctacaaagtgagttccaggacagccagggctatacaga 593
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 741 ctgagttcgaggtcagcctggtctacaaagtgagttccaggacagccaggactatactga 800

                        
Query: 594 gaaaccctgtctc 606
           |||||||||||||
Sbjct: 801 gaaaccctgtctc 813


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1007
Length adjustment: 10
Effective length of query: 596
Effective length of database: 997
Effective search space:   594212
Effective search space used:   594212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)