Query= MSMg01no334_c21.b1 MSMg01no334_c21.b1 CHROMAT_FILE:
MSMg01no334_c21.b1 PHD_FILE: MSMg01no334_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:31 2005
(219 letters)
>mm_chr3_155968394_155969012
Length = 619
Score = 373 bits (193), Expect = e-108
Identities = 210/219 (95%), Gaps = 6/219 (2%)
Strand = Plus / Plus
Query: 1 cttgttaaacacatccactcccaggacaacaattacaaacctaaatgagtgcccctgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgttaaacacatccactcccaggacaacaattacaaacctaaatgagtgcccctgatg 260
Query: 61 aaaatgaattgcttcaaacctcattagggagtttaaagatgtgtgggaaattcaggaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaatgaattgcttcaaacctcattagggagtttaaagatgtgtgggaaattcaggaagt 320
Query: 121 agagtgaaagcatgtgacacacacacacacacacacacagtgagtgtgtatacatgtgtg 180
||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 321 agagtgaaagcatgtgacacacacacacacaca------gtgagtgtgtatacgtgtgtg 374
Query: 181 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 219
|||||| ||| ||||||||||||||||||||||||||||
Sbjct: 375 tgtgtgcgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgt 413
Score = 101 bits (52), Expect = 4e-26
Identities = 56/58 (96%), Gaps = 2/58 (3%)
Strand = Plus / Plus
Query: 164 gtgtgtatacatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg--tgtgtgt 219
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 541 gtgtgtatacatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgtgtgt 598
Score = 72.3 bits (37), Expect = 2e-17
Identities = 41/43 (95%), Gaps = 2/43 (4%)
Strand = Plus / Plus
Query: 175 tgtgtgtgtgtgtgtgtgtgtgtgtgtg--tgtgtgtgtgtgt 215
|||||||||||||||||||||||||||| |||||||||||||
Sbjct: 562 tgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgtgtgtgtgtgt 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 116
Number of extensions: 34
Number of successful extensions: 34
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 4
Length of query: 219
Length of database: 619
Length adjustment: 9
Effective length of query: 210
Effective length of database: 610
Effective search space: 128100
Effective search space used: 128100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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