TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAGAAGACCGCGGAA
TTCTGTCCTTGGCATTCTTCTGGGAGAAAAAAAAATCAATTGTTTTATCC
AATGTTGGACCCTGCTGGCTATAAGATGTTCCCATTAGTTCCTAAAAGCA
TCTGGGCTAAGTATAGGGGAAACATCTGTTCACTTGGTTAGCTATGAGGC
CTGGTCCACAGAAGGAAATTTAGGTATAGAACCCTAAACATGGCCAAAAT
TTATGGCTAGGAAAACCTATTATTGTGTTGCTAAATGGTCATATTGTCAA
GCTGCCTTGTAAATATTTATGTTTCTATCTGTAGATGTGAGCCTTGGTCA
AAGAAGCTCCTTATAGATGTAGGTAGTGGTTAATGCAGAGATGCCTAACA
GCTCAAGTGCTGAGAATAAGCAATTGTTCCATTGTTCCCCCCCCACCCCC
CCCTCCGACAGTAGGTGGGACATCTAGCATCCTGCCCTGCCTTGGGGCTC
AGGGATCATTGTGGAAGAGAGAGGAAACAAAGTAAGAGCCACAGTACGAG
GTGGAGTGCCACCGGTGAGAGGTTGCAGCTGCACATGGGCTGTCGGATGG
GTCAACTCACAGGACTGGGTTGCCTGCAAAAGATCATGTCAGGAAAATTC
CTGCATAGACAGGGAGGAGCCGGTGGATGGCACCATACGACGACACACAT
ATGGGCAGCACTAATACCTCAGCGTGT

CCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACTTTATCGCCCCAGTACAGGGTAA
CGCCAGGGCCAAAAAGGGGCAGTGGGTGGGTAGGGGAGTGCGCTTTTCCC
CCTTTTCTTCCCTCCTCTTCTCCCCCTTCCCTTTCCCCTTTTCTCCTTCC
CCCCTCTCTCCCCTTCTCCCCCCCCTCTTCTTCCCTCCCCCCTCCTTTCT
TTTCCCTCCCTTTCCTCCCTTCTCCCCTTCTTCCTTCTTCCTTTTCTCCC
CCTCTTCCCCCCCCTTCCCCTTTTTCTACTTCCTCCCCCCCTTTCTCTCC
TCCCCCCCCTTCCCCCTCCTTTTTTCCTCTTCCCTTTTCCCCCCTTCTTT
CCCCCCTCCTTTTCCCTTTTCCCCTTCCCCCCTTCTTCCCCCGTCCTCCC
TCTTCTTCCCCCCCTTCTCTTTCCCCCCCTTACCCCCCCTCCTTTCCCCC
CCTCCTCTCCCCCTCCTTTCCCCTCCCCCCCCTTCCTCTTCTCCTTTTTT
CCCCCCCTCTCCCCCCTCTCCCTCTTTCCTTCTCTTTTTTATTCTCTCCT
TCCCCTCTCTCCCTTTCCCTCCCTTTCCCCCTTTCTCTCTCTCCCCCTCC
CCCTCTTCCCCTTTTTTTTCCCCCCCTCCCCCCTTTTCTCTTCTCCCCCC
TTCCTCTTCCCTTTTCTTTTTTCCCCCCTTCCCCTCCTTTTTCCCCCTCC
TTTCTCTCCCCCCCCCCTATCTCCTCTCCCCCCTCCCCTCCCTTTCCTCT
CCCCTTTCCCCCCATTTCCTCCCCTTTTCCCCCCCTCTCTCTTTT

Query= MSMg01no334_p12.b1 MSMg01no334_p12.b1 CHROMAT_FILE:
MSMg01no334_p12.b1 PHD_FILE: MSMg01no334_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:34 2005
         (667 letters)



>mm_chr3_126660555_126661621
          Length = 1067

 Score = 1123 bits (581), Expect = 0.0
 Identities = 638/665 (95%), Gaps = 16/665 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctgtccttgg-cattcttctgggagaaaaaaaaatcaattgttttatccaatgt 62
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgtccttggtc-ttcttctgggagaaaaaaaaatcaattgttttatccaatgt 262

                                                                       
Query: 63  tggaccctgctggctataagatgttcccattagttcctaaaagcatctgggctaagtata 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tggaccctgctggctataagatgttcccattagttcctaaaagcatctgggctaagtata 322

                                                                       
Query: 123 ggggaaacatctgttcacttggttagctatgaggcctggtccacagaaggaaatttaggt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggggaaacatctgttcacttggttagctatgaggcctggtccacagaaggaaatttaggt 382

                                                                       
Query: 183 atagaaccctaaacatggccaaaatttatggctaggaaaacctattattgtgttgctaaa 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atagaaccctaaacatggccaaaatttatggctaggaaaacctattattgtgttgctaaa 442

                                                                       
Query: 243 tggtcatattgtcaagctgccttgtaaatatttatgtttctatctgtagatgtgagcctt 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tggtcatattgtcaagctgccttgtaaatatttatgtttctatctgtagatgtgagcctt 502

                                                                       
Query: 303 ggtcaaagaagctccttatagatgtaggtagtggttaatgcagagatgcctaacagctca 362
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 503 ggtcaaagaagctccttatagatgtaggtagtggttaatgcagagatgcctaactgctca 562

                                                                       
Query: 363 agtgctgagaataagcaattgttccattgttccccccccacccccccctccgacagtagg 422
           ||||||||||||||||||||||||  ||||| |||||  |            ||||||||
Sbjct: 563 agtgctgagaataagcaattgttctgttgtttccccc--a------------acagtagg 608

                                                                       
Query: 423 tgggacatctagcatcctgccctgccttggggctcagggatcattgtggaagagagagga 482
           |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 609 tggggcatctagcatcctgccctgccttggggctcagggatcattgtggaagaaagagga 668

                                                                       
Query: 483 aacaaagtaagagccacagtacgaggtggagtgccaccggtgagaggttgcagctgcaca 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aacaaagtaagagccacagtacgaggtggagtgccaccggtgagaggttgcagctgcaca 728

                                                                       
Query: 543 tgggctgtcggatgggtcaactcacaggactgggttgcctgcaaaagatcatgtcaggaa 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 729 tgggctgtcggatgggtcaactcacaggactgggttgcctgcaaaagatcatgccaggaa 788

                                                                       
Query: 603 aattcctgcatagacagggaggagccggtggatggcaccatacgacgacacacatatggg 662
           |||||||| ||||| |||||||||||||||||||||||||||||||||  ||||||||||
Sbjct: 789 aattcctgtatagagagggaggagccggtggatggcaccatacgacgatgcacatatggg 848

                
Query: 663 cagca 667
           |||||
Sbjct: 849 cagca 853


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space:   694449
Effective search space used:   694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)